RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 AIG1Q9NVV5 245 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 GAR1Q9NY12 217 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF69Q9UC07 566 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 LEF1Q9UJU2 399 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PURGQ9UJV8 347 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 FZR1Q9UM11 496 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CORO2BQ9UQ03 480 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PPIAL4AQ9Y536 164 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 INSIG2Q9Y5U4 225 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TANC2Q9HCD6 1990 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM247A6NEH6 219 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF726A6NNF4 738 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 F5H0A9 414 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TRAPPC2LH3BP13 241 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 RFXANKO14593 260 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ITM2AO43736 263 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 NDUFA7O95182 113 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 FARS2O95363 451 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 IGHV1-46P01743 117 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 IGHV2-70P01814 119 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SERPINE1P05121 402 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 BCHEP06276 602 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 PGA4P0DJD7 388 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 PGA3P0DJD8 388 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 NQO1P15559 274 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TUBG1P23258 451 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 HTR2AP28223 471 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 MTNR1AP48039 350 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 CSNK1A1P48729 337 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 BPIFB3P59826 476 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ABCE1P61221 599 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 CFHR3Q02985 330 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 RBBP4Q09028 425 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 BAMBIQ13145 260 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC9A3R2Q15599 337 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TBC1D28Q2M2D7 210 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC36A2Q495M3 483 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 C4orf46Q504U0 113 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 FAM205BPQ63HN1 556 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ATG16L1Q676U5 607 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 MZT2AQ6P582 158 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 C16orf87Q6PH81 154 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 DHRS4L2Q6PKH6 230 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 UNQ6126/PRO20091Q6UXV3 157 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 LRRC28Q86X40 367 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 NUDCD3Q8IVD9 361 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SPICQ8N5J4 248 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF283Q8N7M2 679 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 OR6N1Q8NGY5 312 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 BBS10Q8TAM1 723 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ST7LQ8TDW4 575 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 UBLCP1Q8WVY7 318 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 C22orf15Q8WYQ4 148 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TMIGD2Q96BF3 282 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 UPRTQ96BW1 309 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC25A44Q96H78 314 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 GAL3ST1Q99999 423 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 EMC6Q9BV81 110 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM109Q9BVC6 243 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 MRPL13Q9BYD1 178 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 EGLN1Q9GZT9 426 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 LRMDAQ9H2I8 198 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 PATZ1Q9HBE1 687 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 MMP26Q9NRE1 261 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 SDR39U1Q9NRG7 319 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 TUBG2Q9NRH3 451 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 DECR2Q9NUI1 292 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 GLTPQ9NZD2 209 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 IL20RAQ9UHF4 553 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 NPTNQ9Y639 398 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 AUP1Q9Y679 476 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 CACNG2Q9Y698 323 aa4.26□□□□□ -1.73
R3HDM1-218ENST00000487294 ZSCAN5BA6NJL1 495 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 NPIPB13A6NJU9 1138 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 SMIM23A6NLE4 172 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 SRRM5B3KS81 715 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 NPIPB4C9JG80 1138 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 SDHDO14521 159 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 DHHO43323 396 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF500O60304 480 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 TPST2O60704 377 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 FMO6PO60774 539 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 SPAG7O75391 227 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 ASAH2BP0C7U1 165 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 PATE4P0C8F1 98 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 IDO1P14902 403 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 MDKP21741 143 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 AHCYP23526 432 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 CRATP43155 626 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 MRPL19P49406 292 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 BIDP55957 195 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 ERVS71-1P61550 626 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 LCN2P80188 198 aa4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 MRPS34P82930 218 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-218ENST00000487294 HOXC5Q00444 222 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms