RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 DNAJC19Q96DA6 116 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 C19orf60Q96EN9 201 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 FOXC2Q99958 501 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 GAL3ST2Q9H3Q3 398 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 TMEM9BQ9NQ34 198 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 DAZ3Q9NR90 486 aaKnown RBP2.47□□□□□ -2.01
SMC4-215ENST00000484799 TUBG2Q9NRH3 451 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 AGPAT4Q9NRZ5 378 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 MCUBQ9NWR8 336 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 CD84Q9UIB8 345 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 DDX19BQ9UMR2 479 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 PSG11Q9UQ72 335 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 TRAPPC4Q9Y296 219 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 YARS2Q9Y2Z4 477 aaKnown RBP2.47□□□□□ -2.01
SMC4-215ENST00000484799 F11RQ9Y624 299 aaKnown RBP2.47□□□□□ -2.01
SMC4-215ENST00000484799 WSB1Q9Y6I7 421 aa2.47□□□□□ -2.01
SMC4-215ENST00000484799 NFASCO94856 1347 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 A0A1B0GW55 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CENPXA8MT69 81 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ZNF99A8MXY4 864 aaPredicted RBP2.46□□□□□ -2.02
SMC4-215ENST00000484799 SLC9A3R1O14745 358 aaPredicted RBP2.46□□□□□ -2.02
SMC4-215ENST00000484799 ZBTB5O15062 677 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 MED6O75586 246 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 FLOT1O75955 427 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L2P0CJ85 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L3P0CJ86 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L5P0CJ88 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L6P0CJ89 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L7P0CJ90 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 OR5H8P0DN80 308 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ZNF30P17039 623 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ATF6P18850 670 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 RAB4AP20338 218 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CNR1P21554 472 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CASQ1P31415 396 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CYB561P49447 251 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ZNF121P58317 390 aaPredicted RBP2.46□□□□□ -2.02
SMC4-215ENST00000484799 SLC7A9P82251 487 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ADNP2Q6IQ32 1131 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4L9Q6RFH8 374 aaPredicted RBP2.46□□□□□ -2.02
SMC4-215ENST00000484799 WDR82Q6UXN9 313 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 LINC00173Q6ZV60 143 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 SLC35D2Q76EJ3 337 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 ZNF547Q8IVP9 402 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 VKORC1L1Q8N0U8 176 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CBR4Q8N4T8 237 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 CHST4Q8NCG5 386 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 OR10G4Q8NGN3 311 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 OR6Q1Q8NGQ2 317 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 OR13C9Q8NGT0 318 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 APH1BQ8WW43 257 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 TOP1MTQ969P6 601 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 APH1AQ96BI3 265 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 HAUS4Q9H6D7 363 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DMAP1Q9NPF5 467 aaPredicted RBP2.46□□□□□ -2.02
SMC4-215ENST00000484799 ISYNA1Q9NPH2 558 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 DUX4Q9UBX2 424 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 FLVCR2Q9UPI3 526 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 STK38LQ9Y2H1 464 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
SMC4-215ENST00000484799 AQRO60306 1485 aaKnown RBP eCLIP2.45□□□□□ -2.022e-7■□□□□ 11.1
SMC4-215ENST00000484799 IGLV11-55A0A075B6I3 123 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 A0A1W2PRF3 423 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 A0A1W2PRM7 423 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 SLC22A20A6NK97 555 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 POLR1CO15160 346 aaPredicted RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 SIVA1O15304 175 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 SUPT3HO75486 399 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 SCELO95171 688 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 TGM6O95932 706 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 ADRB3P13945 408 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 GGT1P19440 569 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 RAB5AP20339 215 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 PMCHP20382 165 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 PTNP21246 168 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 CSKP41240 450 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 CDKN2BP42772 138 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 RPS10P46783 165 aaKnown RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 NCBP2P52298 156 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMC4-215ENST00000484799 CLDN6P56747 220 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 TAS2R39P59534 338 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 UBE2MP61081 183 aaKnown RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 RPS15AP62244 130 aaKnown RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 LCN2P80188 198 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 CDH17Q12864 832 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 UNC119Q13432 240 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 ART3Q13508 389 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 TFDP2Q14188 446 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 ZSCAN26Q16670 478 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 FBXO48Q5FWF7 155 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 PIGGQ5H8A4 983 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 LYPD2Q6UXB3 125 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 ABHD12BQ7Z5M8 362 aaPredicted RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
SMC4-215ENST00000484799 UNC93AQ86WB7 457 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 HORMAD1Q86X24 394 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 TMEM183AQ8IXX5 376 aa2.45□□□□□ -2.02
SMC4-215ENST00000484799 PDCL2Q8N4E4 241 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms