RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ISOC1Q96CN7 298 aa17.88■□□□□ 0.45
VCPKMT-203ENST00000484763 DGCR14Q96DF8 476 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-203ENST00000484763 BOD1Q96IK1 185 aa17.88■□□□□ 0.45
VCPKMT-203ENST00000484763 RNF121Q9H920 327 aa17.88■□□□□ 0.45
VCPKMT-203ENST00000484763 RSL24D1Q9UHA3 163 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-203ENST00000484763 SYNGR3O43761 229 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 SRSF10O75494 262 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 CD1AP06126 327 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 ARR3P36575 388 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 GDI2P50395 445 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 RPS25P62851 125 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 SLC3A1Q07837 685 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 ECH1Q13011 328 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 ZNF774Q6NX45 483 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 TMEM53Q6P2H8 277 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 ZNF474Q6S9Z5 364 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 MRGPRGQ86SM5 289 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 LUZP2Q86TE4 346 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 CCDC36Q8IYA8 594 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 OR2G2Q8NGZ5 317 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 PGLYRP3Q96LB9 341 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 WNT5BQ9H1J7 359 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 STUB1Q9UNE7 303 aa17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 SF3B6Q9Y3B4 125 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-203ENST00000484763 TMEM269A0A1B0GVZ9 245 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 EEF1E1-BLOC1S5C9J1V9 151 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 ZNF701M0R085 212 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 EEF1E1O43324 174 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 AIREO43918 545 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 CD79AP11912 226 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 PSMA6P60900 246 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 MFGE8Q08431 387 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 OR1F12Q8NHA8 337 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 AKR7LQ8NHP1 331 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 C4orf45Q96LM5 186 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 KCNJ15Q99712 375 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 COQ7Q99807 217 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 BCL7BQ9BQE9 202 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 TMED9Q9BVK6 235 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 OR51E2Q9H255 320 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 FRRS1LQ9P0K9 344 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 ZNF503-AS2A6NEH8 195 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 OR6C6A6NF89 314 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 LOC110117498-PIK3R3F6TDL0 507 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 CCL21O00585 134 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 LRRTM2O43300 516 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 PNPP00491 289 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 HOXB1P14653 301 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 HOXC12P31275 282 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 MMP16P51512 607 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 CCR9P51686 369 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 PABPC1L2AQ5JQF8 200 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 WDR38Q5JTN6 314 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 SFRP5Q5T4F7 317 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 CATSPERDQ86XM0 798 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 ALDH16A1Q8IZ83 802 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 C17orf78Q8N4C9 275 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 GHSRQ92847 366 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 TMEM203Q969S6 136 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 ATPIF1Q9UII2 106 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 GTF2A1LQ9UNN4 478 aa17.86■□□□□ 0.45
VCPKMT-203ENST00000484763 A8MXE2 369 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 GPRIN2O60269 458 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 NR4A1P22736 598 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 HTR5AP47898 357 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 CX3CR1P49238 355 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 PRKXP51817 358 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 UBE2NP61088 152 aaKnown RBP17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 RAB1AP62820 205 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 GALK2Q01415 458 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 TRAM1Q15629 374 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 PRSS35Q8N3Z0 413 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 SPTSSAQ969W0 71 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 DOK1Q99704 481 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 MOB1AQ9H8S9 216 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 FAM206AQ9NX38 181 aa17.85■□□□□ 0.45
VCPKMT-203ENST00000484763 ARPC4-TTLL3A0A0A6YYG9 625 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 TMEM212A6NML5 194 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 APOC1P02654 83 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 HLA-DPB1P04440 258 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 CRYGSP22914 178 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 OTX1P32242 354 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 CRYBB2P43320 205 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 TUBA1BP68363 451 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 TSC22D1Q15714 1073 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 CTF1Q16619 201 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 GSG1Q2KHT4 349 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 BHLHA15Q7RTS1 189 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 MS4A15Q8N5U1 240 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 ZNF283Q8N7M2 679 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 RELL2Q8NC24 303 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 OR5AK2Q8NH90 309 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 RPL3LQ92901 407 aaKnown RBP17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 PDCD1LG2Q9BQ51 273 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 CHCHD6Q9BRQ6 235 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 COMMD4Q9H0A8 199 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 NOX3Q9HBY0 568 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 G6PC2Q9NQR9 355 aa17.84■□□□□ 0.45
VCPKMT-203ENST00000484763 B3GNT2Q9NY97 397 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms