RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 CARD17Q5XLA6 110 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 LRRC66Q68CR7 880 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 COX18Q8N8Q8 333 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 NECAP1Q8NC96 275 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 APH1BQ8WW43 257 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 SLC38A4Q969I6 547 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 GALNT14Q96FL9 552 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 HSD17B10Q99714 261 aaKnown RBP3.12□□□□□ -1.91
PMS1-219ENST00000483293 RNF5Q99942 180 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 NMRK1Q9NWW6 199 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
PMS1-219ENST00000483293 KCNE3Q9Y6H6 103 aa3.12□□□□□ -1.91
PMS1-219ENST00000483293 COL27A1Q8IZC6 1860 aaPredicted RBP3.11□□□□□ -1.91
PMS1-219ENST00000483293 TRAV19A0A0A6YYK7 116 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 A0A0U1RQV1 116 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 TEX46H3BTG2 121 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 RPL36A-HNRNPH2H7BZ11 118 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 AP3B1O00203 1094 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 FLOT1O75955 427 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 H6PDO95479 791 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 CCNE2O96020 404 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 IGKV1-17P01599 117 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 HLA-DQA1P01909 254 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 OR8U9P0C7N5 309 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 CD37P11049 281 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 ERGP11308 486 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 U2AF2P26368 475 aaKnown RBP eCLIP3.11□□□□□ -1.914e-7■■■□□ 15.2
PMS1-219ENST00000483293 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 RAB10P61026 200 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
PMS1-219ENST00000483293 NEGR1Q7Z3B1 354 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 ARRDC1Q8N5I2 433 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 SNX31Q8N9S9 440 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 CHST4Q8NCG5 386 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 FAM81AQ8TBF8 368 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 PTX4Q96A99 478 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 PRRC1Q96M27 445 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 ZNF317Q96PQ6 595 aaPredicted RBP3.11□□□□□ -1.91
PMS1-219ENST00000483293 TIMM29Q9BSF4 260 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 FGF23Q9GZV9 251 aaPredicted RBP3.11□□□□□ -1.91
PMS1-219ENST00000483293 ZNF160Q9HCG1 818 aa3.11□□□□□ -1.91
PMS1-219ENST00000483293 RRP8O43159 456 aaKnown RBP3.1□□□□□ -1.91
PMS1-219ENST00000483293 SERPINE2P07093 398 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 POLR2MP0CAP2 368 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 MYL2P10916 166 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 BCKDHBP21953 392 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 OR1E1P30953 314 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 C21orf59P57076 290 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 LIPEQ05469 1076 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 TRAM2Q15035 370 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 QPRTQ15274 297 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 RCN1Q15293 331 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 CHRFAM7AQ494W8 412 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 OSR2Q8N2R0 312 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 GPR26Q8NDV2 337 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 OR52E2Q8NGJ4 325 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 OR6N1Q8NGY5 312 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 LINC01560Q8TB33 94 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 OR51E1Q8TCB6 317 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 SEH1LQ96EE3 360 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 DOK1Q99704 481 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 SLC17A4Q9Y2C5 497 aa3.1□□□□□ -1.91
PMS1-219ENST00000483293 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 TRBV11-1A0A0K0K1C0 115 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CTAGE15A4D2H0 777 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 H7C1H1 209 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CDC40O60508 579 aaKnown RBP eCLIP3.09□□□□□ -1.91
PMS1-219ENST00000483293 HLA-DQB1P01920 261 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 IL4P05112 153 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 C1GALT1C1LP0DN25 315 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CSNK2A2P19784 350 aaPredicted RBP3.09□□□□□ -1.91
PMS1-219ENST00000483293 CXCL12P48061 93 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 RAB7AP51149 207 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 RGS8P57771 180 aaPredicted RBP3.09□□□□□ -1.91
PMS1-219ENST00000483293 PRSS8Q16651 343 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 TCEAL5Q5H9L2 206 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CTAGE6Q86UF2 777 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 NKAIN4Q8IVV8 208 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CDKL3Q8IVW4 592 aaPredicted RBP3.09□□□□□ -1.91
PMS1-219ENST00000483293 FAM71AQ8IYT1 594 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CBR4Q8N4T8 237 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 NPWQ8N729 165 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 OR11H7Q8NGC8 314 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 TCEAL3Q969E4 200 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 RNF157Q96PX1 679 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 MYCBPQ99417 103 aaPredicted RBP3.09□□□□□ -1.91
PMS1-219ENST00000483293 TMEM185BQ9H7F4 350 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 NEK6Q9HC98 313 aa3.09□□□□□ -1.91
PMS1-219ENST00000483293 CCDC169A6NNP5 214 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 NCBP2LA6PVI3 153 aaKnown RBP3.08□□□□□ -1.92
PMS1-219ENST00000483293 ZNF850A8MQ14 1090 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 H0YJW9 148 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 BPY2O14599 106 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 SLC9A3R1O14745 358 aaPredicted RBP3.08□□□□□ -1.92
PMS1-219ENST00000483293 RAD51CO43502 376 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 REM1O75628 298 aa3.08□□□□□ -1.92
PMS1-219ENST00000483293 DCNP07585 359 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms