RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CSDC2Q9Y534 153 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
CLK1-212ENST00000482590 IQANK1A0A1B0GTG1 560 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SMCO3A2RU48 225 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 A6NNC1 897 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SAP18O00422 153 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 TP53I11O14683 189 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 ZNF354AO60765 605 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 NDUFS6O75380 124 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 TRAPPC6AO75865 159 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 LRATO95237 230 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 ZNF23P17027 643 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 KLK2P20151 261 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SRD5A2P31213 254 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SPRP35270 261 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 HOXA4Q00056 320 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 PAX5Q02548 391 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SLAMF1Q13291 335 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 GANABQ14697 944 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 EXOSC7Q15024 291 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 EBPQ15125 230 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 SF3B4Q15427 424 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLK1-212ENST00000482590 OR4D1Q15615 310 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 PIGGQ5H8A4 983 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 PXDC1Q5TGL8 231 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 KHDRBS2Q5VWX1 349 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 OR4C11Q6IEV9 310 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 KCNIP4Q6PIL6 250 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 COMMD2Q86X83 199 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 TGIF2LYQ8IUE0 185 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 LACC1Q8IV20 430 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 CTAGE3PQ8IX95 158 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 MUC20Q8N307 709 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 LRRC25Q8N386 305 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 RELL2Q8NC24 303 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 OR52I2Q8NH67 350 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 NEIL3Q8TAT5 605 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 STAG3L4Q8TBR4 150 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 CACNG8Q8WXS5 425 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 TANKQ92844 425 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 ANKRD9Q96BM1 317 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 PPWD1Q96BP3 646 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 SLC25A36Q96CQ1 311 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 ASB9Q96DX5 294 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 CHMP6Q96FZ7 201 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 NAPGQ99747 312 aaPredicted RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 FUNDC2Q9BWH2 189 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 PRRG3Q9BZD7 231 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SHCBP1LQ9BZQ2 653 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 RAB1BQ9H0U4 201 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 OR51B5Q9H339 312 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 ALG9Q9H6U8 611 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 LYARQ9NX58 379 aaKnown RBP5.65□□□□□ -1.5
CLK1-212ENST00000482590 ASIC5Q9NY37 505 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 B3GAT1Q9P2W7 334 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 SNX24Q9Y343 169 aa5.65□□□□□ -1.5
CLK1-212ENST00000482590 DSCAMO60469 2012 aa5.65□□□□□ -1.51
CLK1-212ENST00000482590 ARID1AO14497 2285 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 TMEM120BA0PK00 339 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 SYCE1LA8MT33 242 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 EEF1E1-BLOC1S5C9J1V9 151 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 POC1B-GALNT4F8VUJ3 575 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 PLPP1O14494 284 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 RRHO14718 337 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 RS1O15537 224 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 EEF1E1O43324 174 aaKnown RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 PRKRAO75569 313 aaKnown RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 PIAS1O75925 651 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 ATP5HO75947 161 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 WISP3O95389 354 aaPredicted RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 TXNDC12O95881 172 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 IGKV3-11P04433 115 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 GFAPP14136 432 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 NAGAP17050 411 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 STX2P32856 288 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 GCKP35557 465 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 FHITP49789 147 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 HNRNPH2P55795 449 aaKnown RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 DLX5P56178 289 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 DSTNP60981 165 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 GNG11P61952 73 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 RPS13P62277 151 aaKnown RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 SPHARQ15513 63 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 TAF13Q15543 124 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 ZSCAN26Q16670 478 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 RGS21Q2M5E4 152 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 ZNF791Q3KP31 576 aaPredicted RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 UGT3A2Q3SY77 523 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 ACSF3Q4G176 576 aaPredicted RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 OR4F3Q6IEY1 312 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 OR52E8Q6IFG1 317 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 PAMR1Q6UXH9 720 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 DPY19L4Q7Z388 723 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 GOLGA7Q7Z5G4 137 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 CMC1Q7Z7K0 106 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 RBM45Q8IUH3 476 aaKnown RBP5.64□□□□□ -1.51
CLK1-212ENST00000482590 SLC38A6Q8IZM9 456 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 TMEM99Q8N816 258 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 PROKR2Q8NFJ6 384 aa5.64□□□□□ -1.51
CLK1-212ENST00000482590 OR7G2Q8NG99 324 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms