RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 DDX28Q9NUL7 540 aaKnown RBP21.54■■□□□ 1.04
PERM1-203ENST00000479361 FAM118AQ9NWS6 357 aa21.54■■□□□ 1.04
PERM1-203ENST00000479361 GRIP1Q9Y3R0 1128 aa21.54■■□□□ 1.04
PERM1-203ENST00000479361 TEX15Q9BXT5 2789 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 LOC100130705A0A1B0GUX0 176 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 OVOL3O00110 214 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 SELENOFO60613 162 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 NAA10P41227 235 aaPredicted RBP21.53■■□□□ 1.04
PERM1-203ENST00000479361 EVX1P49640 407 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 RGS6P49758 472 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 NUDT6P53370 316 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 SELENOVP59797 346 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 GGTLC2Q14390 218 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 SLC16A9Q7RTY1 509 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 OTOSQ8NHW6 89 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 ST7LQ8TDW4 575 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 SLAMF6Q96DU3 332 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 COG8Q96MW5 612 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 NKX1-2Q9UD57 310 aaPredicted RBP21.53■■□□□ 1.04
PERM1-203ENST00000479361 PMF1-BGLAPU3KQ54 211 aa21.53■■□□□ 1.04
PERM1-203ENST00000479361 ZNF878C9JN71 531 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 J3QW42 95 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 SLC16A6O15403 523 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 DBHP09172 617 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 TUBG1P23258 451 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 SLC15A1P46059 708 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 SNRPGP62308 76 aaKnown RBP21.52■■□□□ 1.04
PERM1-203ENST00000479361 TAF13Q15543 124 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 SWI5Q1ZZU3 235 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 MST1LQ2TV78 715 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 KRTAP27-1Q3LI81 207 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 RFPL4BQ6ZWI9 263 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 RHOUQ7L0Q8 258 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 OR10S1Q8NGN2 331 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 TRMT61AQ96FX7 289 aaKnown RBP21.52■■□□□ 1.04
PERM1-203ENST00000479361 CNN2Q99439 309 aaKnown RBP21.52■■□□□ 1.04
PERM1-203ENST00000479361 FOXC2Q99958 501 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 COPS4Q9BT78 406 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 ABHD6Q9BV23 337 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 YIPF3Q9GZM5 350 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 TUBG2Q9NRH3 451 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 CENPMQ9NSP4 180 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 ZNF701Q9NV72 531 aaPredicted RBP21.52■■□□□ 1.04
PERM1-203ENST00000479361 HAO2Q9NYQ3 351 aa21.52■■□□□ 1.04
PERM1-203ENST00000479361 WARS2Q9UGM6 360 aaKnown RBP21.52■■□□□ 1.04
PERM1-203ENST00000479361 F5H5K5 113 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 H3BSA7 217 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 DLGAP1O14490 977 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 MPZL2O60487 215 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 LYNP07948 512 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 ZNF250P15622 560 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 PAX1P15863 534 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 HTR1FP30939 366 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 TPTEP56180 551 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 PPP1CBP62140 327 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 ZNF718Q3SXZ3 478 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 SLC25A30Q5SVS4 291 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 MEDAGQ5VYS4 303 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 LRRC75A-AS1Q8N1F1 130 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 SYNPRQ8TBG9 265 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 ZNF582Q96NG8 517 aaPredicted RBP21.51■■□□□ 1.03
PERM1-203ENST00000479361 APOL4Q9BPW4 351 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 CACNG6Q9BXT2 260 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 MRPL37Q9BZE1 423 aaKnown RBP21.51■■□□□ 1.03
PERM1-203ENST00000479361 GSX2Q9BZM3 304 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 DUSP13Q9UII6 198 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 LAMP5Q9UJQ1 280 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 ITGB1BP2Q9UKP3 347 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 TMEM14AQ9Y6G1 99 aa21.51■■□□□ 1.03
PERM1-203ENST00000479361 NGFP01138 241 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 ART1P52961 327 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 GRB2P62993 217 aaKnown RBP21.5■■□□□ 1.03
PERM1-203ENST00000479361 POU4F2Q12837 409 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 TMED1Q13445 227 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 OR5L1Q8NGL2 311 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 THEM6Q8WUY1 208 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 RNF133Q8WVZ7 376 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 UBE2FQ969M7 185 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 APOBEC3DQ96AK3 386 aaPredicted RBP21.5■■□□□ 1.03
PERM1-203ENST00000479361 DNAJC27Q9NZQ0 273 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 FZR1Q9UM11 496 aa21.5■■□□□ 1.03
PERM1-203ENST00000479361 SNTNA6NMZ2 147 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 M0R135 149 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 MRPL3P09001 348 aaKnown RBP21.49■■□□□ 1.03
PERM1-203ENST00000479361 ACSM4P0C7M7 580 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 GCH1P30793 250 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 CDKN1AP38936 164 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 PTH2RP49190 550 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 KLF3P57682 345 aaPredicted RBP21.49■■□□□ 1.03
PERM1-203ENST00000479361 ERVS71-1P61550 626 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 RSPO1Q2MKA7 263 aaPredicted RBP21.49■■□□□ 1.03
PERM1-203ENST00000479361 TTC23Q5W5X9 447 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 SLC25A40Q8TBP6 338 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 ZNF799Q96GE5 643 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 MNTQ99583 582 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 DOK1Q99704 481 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 SYT3Q9BQG1 590 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 GPR160Q9UJ42 338 aa21.49■■□□□ 1.03
PERM1-203ENST00000479361 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.49■■□□□ 1.03
PERM1-203ENST00000479361 RTTNQ86VV8 2226 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms