RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 HCCSP53701 268 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 WNT4P56705 351 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ACTA2P62736 377 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ACTG2P63267 376 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ADAM8P78325 824 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 MRPS34P82930 218 aaKnown RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 RBPJQ06330 500 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 FOXF2Q12947 444 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 NFATC3Q12968 1075 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ENDOGQ14249 297 aaKnown RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 RAB39AQ14964 217 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CEACAM16Q2WEN9 425 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CDONQ4KMG0 1287 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TEX30Q5JUR7 227 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OR2G6Q5TZ20 316 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 SLC18B1Q6NT16 456 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF322Q6U7Q0 402 aaPredicted RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 C3P1Q6ZMU1 363 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 DPY19L4Q7Z388 723 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 LHFPL3Q86UP9 236 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 DOLPP1Q86YN1 238 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF100Q8IYN0 542 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 SYS1Q8N2H4 156 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 KLHL36Q8N4N3 616 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CNEP1R1Q8N9A8 125 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 NAXEQ8NCW5 288 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ST6GALNAC3Q8NDV1 305 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OR10H5Q8NGA6 315 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OR13F1Q8NGS4 319 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OR6K3Q8NGY3 331 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OTOSQ8NHW6 89 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 RORBQ92753 470 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OPALINQ96PE5 141 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 OR5M11Q96RB7 305 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 AMELYQ99218 206 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 FOXB1Q99853 325 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TTTY10Q9BZA0 68 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TMPRSS5Q9H3S3 457 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CRLF2Q9HC73 371 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TMEM38BQ9NVV0 291 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CHCHD3Q9NX63 227 aaKnown RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 PRSS50Q9UI38 385 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 TINAGQ9UJW2 476 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 CAB39Q9Y376 341 aaPredicted RBP5.83□□□□□ -1.48
USP48-208ENST00000479177 LHFPL6Q9Y693 200 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 PRR14LQ5THK1 2151 aa5.83□□□□□ -1.48
USP48-208ENST00000479177 ZNF99A8MXY4 864 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 PHYHO14832 338 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 KRT33AO76009 404 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SEC14L2O76054 403 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 CNOT4O95628 575 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 ABHD16AO95870 558 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 LALBAP00709 142 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 CGAP01215 116 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ITGA5P08648 1049 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 B4GALT1P15291 398 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ZNF823P16415 610 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 PSMB9P28065 219 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 THBS2P35442 1172 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TGFBR2P37173 567 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 FOXG1P55316 489 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 SH3BGRP55822 239 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 LSM6P62312 80 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 ROM1Q03395 351 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SPHARQ15513 63 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TIGD6Q17RP2 521 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TP53I3Q53FA7 332 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ZNF684Q5T5D7 378 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SYT6Q5T7P8 510 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 FBXW9Q5XUX1 488 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TMPRSS11AQ6ZMR5 421 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 CFAP77Q6ZQR2 320 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ZNF627Q7L945 461 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 DCXRQ7Z4W1 244 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ABHD12BQ7Z5M8 362 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 GPR141Q7Z602 305 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SATL1Q86VE3 508 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 LINC00346Q8IVM7 164 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 OR10S1Q8NGN2 331 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 OR52N5Q8NH56 324 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ST7LQ8TDW4 575 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SPRYD4Q8WW59 207 aaPredicted RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 ASB17Q8WXJ9 295 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TMIGD2Q96BF3 282 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 MRPL48Q96GC5 212 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 C4orf36Q96KX1 117 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 COG8Q96MW5 612 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 CLUHP3Q96NS8 147 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 OR8B4Q96RC9 309 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TTYH2Q9BSA4 534 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ABHD6Q9BV23 337 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ZNF416Q9BWM5 594 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SFXN3Q9BWM7 321 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 RBM24Q9BX46 236 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 RBM38Q9H0Z9 239 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 NELFAQ9H3P2 528 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 ISG20L2Q9H9L3 353 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 SEC61A2Q9H9S3 476 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SIAEQ9HAT2 523 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms