RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PLPP7Q8NBV4 271 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 OR9K2Q8NGE7 335 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ADAMTS15Q8TE58 950 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 INTS14Q96SY0 518 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 A0A0A6YYD5 115 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ELOA3DA6NLF2 546 aaPredicted RBP19.11■□□□□ 0.65
SDF4-206ENST00000478938 MAP3K8P41279 467 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ELOA3BQ3SY89 546 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ELOA3Q8NG57 546 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ABHD5Q8WTS1 349 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 FRZBQ92765 325 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 IL17BQ9UHF5 180 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 LAMP5Q9UJQ1 280 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 TICRRQ7Z2Z1 1910 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 C4orf47A7E2U8 309 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 CTSAP10619 480 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 SMAD4Q13485 552 aaKnown RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 JOSD1Q15040 202 aaPredicted RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 ISXQ2M1V0 245 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 GXYLT1Q4G148 440 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 THEM4Q5T1C6 240 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 FAM220AQ7Z4H9 259 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 ZDHHC22Q8N966 263 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 OR13C9Q8NGT0 318 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 SLC41A2Q96JW4 573 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 SERTAD3Q9UJW9 196 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 PPIL1Q9Y3C6 166 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 ZNF705GA8MUZ8 300 aaPredicted RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 LYL1P12980 280 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 ARRB1P49407 418 aaPredicted RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 SLC9A3R2Q15599 337 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 PCSK9Q8NBP7 692 aaKnown RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 SLC22A18Q96BI1 424 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 ZNF689Q96CS4 500 aaPredicted RBP19.1■□□□□ 0.65
SDF4-206ENST00000478938 MRGPRX3Q96LB0 322 aa19.1■□□□□ 0.65
SDF4-206ENST00000478938 MRPL2Q5T653 305 aaKnown RBP19.09■□□□□ 0.65
SDF4-206ENST00000478938 THNSL2Q86YJ6 484 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 FAM83CQ9BQN1 747 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 NELFAQ9H3P2 528 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 A0A1W2PR48 441 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 CST4P01036 141 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 NGFRP08138 427 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 CHATP28329 748 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 TDGF1P3P51864 188 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 PMPCAQ10713 525 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 LEG1Q6P5S2 330 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 NPRL2Q8WTW4 380 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 OR10C1Q96KK4 312 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 AIF1LQ9BQI0 150 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 AICDAQ9GZX7 198 aa19.09■□□□□ 0.65
SDF4-206ENST00000478938 MTHFD2LQ9H903 347 aaPredicted RBP19.09■□□□□ 0.65
SDF4-206ENST00000478938 C1QTNF3-AMACRE9PGA6 284 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 SLC17A2O00624 439 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 LAMP2P13473 410 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 S1PR1P21453 382 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 MARCH1Q8TCQ1 289 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 CNTNAP3Q9BZ76 1288 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 CBLN4Q9NTU7 201 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 GSKIPQ9P0R6 139 aa19.08■□□□□ 0.65
SDF4-206ENST00000478938 OR4C45A6NMZ5 311 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 RAB27BO00194 218 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 C1QL1O75973 258 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 THEGLP0DJG4 465 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 CD37P11049 281 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 CD70P32970 193 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 SNRPD1P62314 119 aaKnown RBP19.08■□□□□ 0.64
SDF4-206ENST00000478938 TSEN15Q8WW01 171 aaKnown RBP19.08■□□□□ 0.64
SDF4-206ENST00000478938 SNX22Q96L94 193 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 FBXL17Q9UF56 701 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 IKZF2Q9UKS7 526 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 EML5Q05BV3 1969 aa19.08■□□□□ 0.64
SDF4-206ENST00000478938 SOHLH1Q5JUK2 328 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 FAM46CQ5VWP2 391 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 POC1BQ8TC44 478 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 HPSE2Q8WWQ2 592 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 RASD2Q96D21 266 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 KLF16Q9BXK1 252 aaPredicted RBP19.07■□□□□ 0.64
SDF4-206ENST00000478938 DOK2O60496 412 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 AIFM1O95831 613 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 HRH1P35367 487 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 THBS4P35443 961 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 TAGLN2P37802 199 aaKnown RBP19.07■□□□□ 0.64
SDF4-206ENST00000478938 VASPP50552 380 aaPredicted RBP19.07■□□□□ 0.64
SDF4-206ENST00000478938 MRPS11P82912 194 aaKnown RBP19.07■□□□□ 0.64
SDF4-206ENST00000478938 LMAN2Q12907 356 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 FAHD2BQ6P2I3 314 aaPredicted RBP19.07■□□□□ 0.64
SDF4-206ENST00000478938 MED25Q71SY5 747 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 NPEPL1Q8NDH3 523 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 RSC1A1Q92681 617 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 NKD1Q969G9 470 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 RAB39BQ96DA2 213 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 DTD2Q96FN9 168 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 FAHD2AQ96GK7 314 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 SLCO5A1Q9H2Y9 848 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 RXFP3Q9NSD7 469 aa19.07■□□□□ 0.64
SDF4-206ENST00000478938 C4orf51C9J302 202 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 PEX12O00623 359 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 ELFN1P0C7U0 828 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 CCKBRP32239 447 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 SMAD3P84022 425 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms