RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SDK1Q7Z5N4 2213 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 NUP205Q92621 2012 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 IGKV2-29A2NJV5 120 aaPredicted RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 KRT87PA6NCN2 255 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TRIM64A6NGJ6 449 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TRIM64BA6NI03 449 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 H7C417 338 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 AQP9O43315 295 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PRPSAP2O60256 369 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 FCMRO60667 390 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 NOL3O60936 208 aaKnown RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 SERPINA3P01011 423 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MAS1P04201 325 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PABPC4LP0CB38 370 aaKnown RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 ERGP11308 486 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 ATF6P18850 670 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 HTR1DP28221 377 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 LAP3P28838 519 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TNNT2P45379 298 aaPredicted RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 CDKN1BP46527 198 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 CEBPDP49716 269 aaPredicted RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 ACOT2P49753 483 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 NUDT2P50583 147 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 ARFIP1P53367 373 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 YWHAGP61981 247 aaKnown RBP eCLIP0.3□□□□□ -2.36
HPS3-205ENST00000478525 AP1B1Q10567 949 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 SELPLGQ14242 412 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PDK3Q15120 406 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PTPN20Q4JDL3 420 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 CNSTQ6PJW8 725 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 DEGS2Q6QHC5 323 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TBPL2Q6SJ96 375 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MDP1Q86V88 176 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 SLC38A6Q8IZM9 456 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 EID2Q8N6I1 236 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 COX18Q8N8Q8 333 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 ANKFN1Q8N957 763 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 SPATA4Q8NEY3 305 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 OR2Z1Q8NG97 314 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 OR10J6PQ8NGY7 276 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 ZNF502Q8TBZ5 544 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 ENKURQ8TC29 256 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 SLC2A14Q8TDB8 520 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 GPR151Q8TDV0 419 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TMEM230Q96A57 120 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TRIM44Q96DX7 344 aaPredicted RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 Q96MT0 163 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MS4A4EQ96PG1 132 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 NPY6RQ99463 290 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PDCD1LG2Q9BQ51 273 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 TCHPQ9BT92 498 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 HIGD2AQ9BW72 106 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 FAIM2Q9BWQ8 316 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 API5Q9BZZ5 524 aaKnown RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 HSD3B7Q9H2F3 369 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 NMRAL1Q9HBL8 299 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MED4Q9NPJ6 270 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PDP1Q9P0J1 537 aaPredicted RBP0.3□□□□□ -2.36
HPS3-205ENST00000478525 CLN8Q9UBY8 286 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 VANGL2Q9ULK5 521 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PIGLQ9Y2B2 252 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 POLDIP2Q9Y2S7 368 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MEMO1Q9Y316 297 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 HES2Q9Y543 173 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 GBF1Q92538 1859 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 PALLDQ8WX93 1383 aa0.3□□□□□ -2.36
HPS3-205ENST00000478525 MDC1Q14676 2089 aaKnown RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 OTOFQ9HC10 1997 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 IGKV1D-43A0A0B4J1Z2 117 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 A0A1B0GWJ7 208 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 FAM47DPA6NHR8 397 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 OR5H1A6NKK0 313 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 PDZK1P1A8MUH7 402 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 LY6LH3BQJ8 138 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 TNFRSF11BO00300 401 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 ANGPT2O15123 496 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 MAGEB3O15480 346 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 PSTPIP1O43586 416 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 GLSO94925 669 aaPredicted RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 CDS2O95674 445 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 AK1P00568 194 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 IGHV1-46P01743 117 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 UGT2B4P06133 528 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 CTSLP07711 333 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 MCF2P10911 925 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 EPB41P11171 864 aaKnown RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 RPA2P15927 270 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 GAP43P17677 238 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 EIF2S2P20042 333 aaKnown RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 NTF3P20783 257 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 ATP6V1C1P21283 382 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 MYL9P24844 172 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 CEACAM3P40198 252 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 RBM34P42696 430 aaKnown RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 UQCRFS1P47985 274 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 CDKN2DP55273 166 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 MRPS22P82650 360 aaKnown RBP0.29□□□□□ -2.36
HPS3-205ENST00000478525 IFITM3Q01628 133 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 LIPEQ05469 1076 aa0.29□□□□□ -2.36
HPS3-205ENST00000478525 FGL1Q08830 312 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms