RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CXCL13O43927 109 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ALX3O95076 343 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 MPZL1O95297 269 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 FARS2O95363 451 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 ECDO95905 644 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 PNPP00491 289 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 OPN1LWP04000 364 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 EIF4EP06730 217 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 CST2P09228 141 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 RFPL3SP0C7P2 107 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 GSTT2BP0CG30 244 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 PSKH1P11801 424 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ZNF708P17019 499 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 IGFBP3P17936 291 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 CCL1P22362 96 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 RPS27P42677 84 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 MAP2K3P46734 347 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 SOX2P48431 317 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 CLDN20P56880 219 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ARG2P78540 354 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 NHLH1Q02575 133 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DBPQ10586 325 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 DYRK1AQ13627 763 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 SLC10A1Q14973 349 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 RAB11BQ15907 218 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 CARD17Q5XLA6 110 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 IGFL2Q6UWQ7 119 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 PGAP1Q75T13 922 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 FCRLAQ7L513 359 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DOK3Q7L591 496 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 CHMP1BQ7LBR1 199 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 AAED1Q7RTV5 226 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 LUZP2Q86TE4 346 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 LINC00346Q8IVM7 164 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 SERPINA12Q8IW75 414 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 TMEM251Q8N6I4 163 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ZIC4Q8N9L1 334 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DUSP18Q8NEJ0 188 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 OR5D14Q8NGL3 314 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 OR13C3Q8NGS6 347 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ENKURQ8TC29 256 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 PHF21AQ96BD5 680 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 HAVCR1Q96D42 359 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 SIGLEC12Q96PQ1 595 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 UCN2Q96RP3 112 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 UQCC2Q9BRT2 126 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 THAP7Q9BT49 309 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 SRXN1Q9BYN0 137 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 PBOV1Q9GZY1 135 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 HDHD2Q9H0R4 259 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 CCDC86Q9H6F5 360 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 LIN7BQ9HAP6 207 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 PLEKHA1Q9HB21 404 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DIABLOQ9NR28 239 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 C14orf119Q9NWQ9 140 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ETAA1Q9NY74 926 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ASH2LQ9UBL3 628 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 ING1Q9UK53 422 aaPredicted RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 TBC1D24Q9ULP9 559 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 GTF2A1LQ9UNN4 478 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 MRPS18BQ9Y676 258 aaKnown RBP7.02□□□□□ -1.29
VMA21-203ENST00000477649 SDK2Q58EX2 2172 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 GPR179Q6PRD1 2367 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 SPTBN4Q9H254 2564 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 TRAV17A0A0B4J275 112 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 A0A0G2JMP0 313 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 A0A0U1RQV5 110 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 A0A0X1KG70 313 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 LOC100289279A0A1B0GTE1 492 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 A0A1W2PPK0 400 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 LOC390937A0A1W2PQ73 354 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 ARGFXA6NJG6 315 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 GABARAPH6UMI1 98 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 MAGEB3O15480 346 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 LYRM1O43325 122 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 SYT7O43581 403 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 RAMP1O60894 148 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 MTRF1O75570 445 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 PAHP00439 452 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 ALDOBP05062 364 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 HNRNPCP07910 306 aaKnown RBP eCLIP7.01□□□□□ -1.29
VMA21-203ENST00000477649 FCGR2AP12318 317 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 CPN1P15169 458 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 RAB6AP20340 208 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 AZGP1P25311 298 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 OTX1P32242 354 aaPredicted RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 EIF2S3P41091 472 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 MEOX1P50221 254 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 LHX2P50458 406 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 NOVA1P51513 510 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 CLDN15P56746 228 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 CLDN18P56856 261 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 PPIAP62937 165 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 SSBP1Q04837 148 aaKnown RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 MFGE8Q08431 387 aaPredicted RBP7.01□□□□□ -1.29
VMA21-203ENST00000477649 RAB35Q15286 201 aa7.01□□□□□ -1.29
VMA21-203ENST00000477649 SGCAQ16586 387 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms