RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TM7SF3Q9NS93 570 aa13.72□□□□□ -0.21
CLSTN1-205ENST00000477264 LDLRAD4O15165 306 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 SCGNO76038 276 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 SLC35G6P0C7Q6 338 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 ALOX5APP20292 161 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 VAMP1P23763 118 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 CCKBRP32239 447 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 EMDP50402 254 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 DEFA6Q01524 100 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 WDR38Q5JTN6 314 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 ZNF614Q8N883 585 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 OR51A4Q8NGJ6 313 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 RSC1A1Q92681 617 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 NAA11Q9BSU3 229 aaPredicted RBP13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 KCNK15Q9H427 330 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 RAB18Q9NP72 206 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 UFSP2Q9NUQ7 469 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 DAPP1Q9UN19 280 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 LHX6Q9UPM6 363 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
CLSTN1-205ENST00000477264 TRBV23-1A0A0A0MS06 115 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 EFSO43281 561 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 MED6O75586 246 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 HOXC4P09017 264 aaPredicted RBP13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 GRK6P43250 576 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 HTR5AP47898 357 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 COL9A2Q14055 689 aaPredicted RBP13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 RHEBQ15382 184 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 OR52W1Q6IF63 320 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 DHRS11Q6UWP2 260 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 KCTD9Q7L273 389 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 STX12Q86Y82 276 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 OR6N2Q8NGY6 317 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 ASB17Q8WXJ9 295 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 AQP3Q92482 292 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 PFDN5Q99471 154 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 MESP1Q9BRJ9 268 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 LYRM4Q9HD34 91 aa13.71□□□□□ -0.22
CLSTN1-205ENST00000477264 SCN3AQ9NY46 2000 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 A0A1W2PPE3 182 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 IFNA17P01571 189 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 ADH6P28332 368 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 LAP3P28838 519 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 CD1CP29017 333 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 PEBP1P30086 187 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 MAS1LP35410 378 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 DNLZQ5SXM8 178 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 TMEM225Q6GV28 225 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 VN1R4Q7Z5H5 301 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 CASTOR1Q8WTX7 329 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 LMF1Q96S06 567 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 INTS14Q96SY0 518 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 TOLLIPQ9H0E2 274 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 MBNL1Q9NR56 388 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 KCNG2Q9UJ96 466 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 DHDHQ9UQ10 334 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
CLSTN1-205ENST00000477264 FAM171A2A8MVW0 826 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 RENP00797 406 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 SMIM10L1P0DMW3 83 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 LIPCP11150 499 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 LPAR6P43657 344 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 RAB1AP62820 205 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 ZNF141Q15928 474 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 Q6ZS52 159 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 RHOUQ7L0Q8 258 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 SLC29A4Q7RTT9 530 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 RNF128Q8TEB7 428 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 RAB3CQ96E17 227 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 SHDQ96IW2 340 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 NECAB3Q96P71 396 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 MAP3K3Q99759 626 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 SLC5A7Q9GZV3 580 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 LMAN1LQ9HAT1 526 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 PHPT1Q9NRX4 125 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 MRPS33Q9Y291 106 aaKnown RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 TMED7Q9Y3B3 224 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 ERCC1P07992 297 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 IGFBP3P17936 291 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 GABRG2P18507 467 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 ACKR3P25106 362 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 CD80P33681 288 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 PRICKLE4Q2TBC4 344 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 AWAT1Q58HT5 328 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 HIST2H3AQ71DI3 136 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 OR4N5Q8IXE1 308 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 ZNF440Q8IYI8 595 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 NKAIN3Q8N8D7 197 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
CLSTN1-205ENST00000477264 DTWD2Q8NBA8 298 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms