RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TMEFF2Q9UIK5 374 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-205ENST00000476387 GRIP1Q9Y3R0 1128 aa13.81□□□□□ -0.2
COL1A1-205ENST00000476387 TANC2Q9HCD6 1990 aa13.81□□□□□ -0.2
COL1A1-205ENST00000476387 OR6C6A6NF89 314 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 B4DSR2 109 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 RER1O15258 196 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 NGFP01138 241 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 COL8A2P25067 703 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 MAGEB1P43366 347 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 RGS6P49758 472 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 ZNF81P51508 661 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CCL8P80075 99 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 TEKQ02763 1124 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-205ENST00000476387 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 LNX2Q8N448 690 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CYB561A3Q8NBI2 242 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 OR2AJ1Q8NGZ0 328 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 OR2T4Q8NH00 348 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 SLC7A6Q92536 515 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 COG8Q96MW5 612 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CDADC1Q9BWV3 514 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CYSLTR2Q9NS75 346 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 DECR2Q9NUI1 292 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 NKIRAS2Q9NYR9 191 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 CGGBP1Q9UFW8 167 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-205ENST00000476387 KLHL21Q9UJP4 597 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 POMPQ9Y244 141 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
COL1A1-205ENST00000476387 ARRDC5A6NEK1 342 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-205ENST00000476387 IFNGP01579 166 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 TFP02787 698 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 TUBG1P23258 451 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 LIPAP38571 399 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 COX10Q12887 443 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 BNIP1Q12981 228 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 CCNIQ14094 377 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 CORO6Q6QEF8 472 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 CLDND2Q8NHS1 167 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 GTF3AQ92664 365 aaKnown RBP13.79□□□□□ -0.2
COL1A1-205ENST00000476387 DCLRE1CQ96SD1 692 aaKnown RBP13.79□□□□□ -0.2
COL1A1-205ENST00000476387 FEVQ99581 238 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 COQ7Q99807 217 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 TUBG2Q9NRH3 451 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 ZNF275Q9NSD4 429 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-205ENST00000476387 KCNG2Q9UJ96 466 aa13.79□□□□□ -0.2
COL1A1-205ENST00000476387 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 H3BN98 237 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 J3QW42 95 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 GSC2O15499 205 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 FKBP6O75344 327 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 RP2O75695 350 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 ATP5HO75947 161 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 ZNF823P16415 610 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 ZNF3P17036 446 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 PYCR1P32322 319 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 CBX1P83916 185 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 DBPQ10586 325 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-205ENST00000476387 TSTQ16762 297 aaKnown RBP13.78□□□□□ -0.2
COL1A1-205ENST00000476387 FAM209AQ5JX71 171 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 LIPNQ5VXI9 398 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 CD300LDQ6UXZ3 194 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 GLCCI1Q86VQ1 547 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 LINC00346Q8IVM7 164 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 RFLNBQ8N5W9 214 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 SLC37A3Q8NCC5 494 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 YIPF5Q969M3 257 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 PITX2Q99697 317 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 C19orf24Q9BVV8 132 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
COL1A1-205ENST00000476387 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
COL1A1-205ENST00000476387 PDP1Q9P0J1 537 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-205ENST00000476387 PPIHO43447 177 aaKnown RBP13.77□□□□□ -0.21
COL1A1-205ENST00000476387 SPRY3O43610 288 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 DBHP09172 617 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 SRP14P37108 136 aaKnown RBP13.77□□□□□ -0.21
COL1A1-205ENST00000476387 ERFP50548 548 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 MMP15P51511 669 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 HIST1H3AP68431 136 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 ECH1Q13011 328 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 CRMP1Q14194 572 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 HIST2H3PS2Q5TEC6 136 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 SLC18B1Q6NT16 456 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 HIST2H3AQ71DI3 136 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 OR5L1Q8NGL2 311 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 OR9Q1Q8NGQ5 310 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-205ENST00000476387 ELMOD3Q96FG2 381 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 ATF6BQ99941 703 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 POFUT1Q9H488 388 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms