RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 OTOSQ8NHW6 89 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 ST7LQ8TDW4 575 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 CNN2Q99439 309 aaKnown RBP25.46■■□□□ 1.67
HOXB3-208ENST00000476342 DDX28Q9NUL7 540 aaKnown RBP25.46■■□□□ 1.67
HOXB3-208ENST00000476342 TBCCD1Q9NVR7 557 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 BEX4Q9NWD9 120 aaPredicted RBP25.46■■□□□ 1.67
HOXB3-208ENST00000476342 WARS2Q9UGM6 360 aaKnown RBP25.46■■□□□ 1.67
HOXB3-208ENST00000476342 B9A039 149 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 ZNF878C9JN71 531 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 CD8AP01732 235 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 DBHP09172 617 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 RGS6P49758 472 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 EFNB3Q15768 340 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 DEFB113Q30KQ7 82 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 MEDAGQ5VYS4 303 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 OR10S1Q8NGN2 331 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 ABHD4Q8TB40 342 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 SPTSSAQ969W0 71 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 MRPL24Q96A35 216 aaKnown RBP25.46■■□□□ 1.67
HOXB3-208ENST00000476342 APOL4Q9BPW4 351 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 COPS4Q9BT78 406 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 YIPF3Q9GZM5 350 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 PLK3Q9H4B4 646 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 HAO2Q9NYQ3 351 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 DNAJC27Q9NZQ0 273 aa25.46■■□□□ 1.67
HOXB3-208ENST00000476342 LYNP07948 512 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 HTR1FP30939 366 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 NUDT6P53370 316 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 RIPK1Q13546 671 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 TAF13Q15543 124 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 SLC25A30Q5SVS4 291 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 TTC23Q5W5X9 447 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 C11orf71Q6IPW1 123 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 RFPL4BQ6ZWI9 263 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 ZNF582Q96NG8 517 aaPredicted RBP25.45■■□□□ 1.66
HOXB3-208ENST00000476342 ABHD6Q9BV23 337 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 CENPMQ9NSP4 180 aa25.45■■□□□ 1.66
HOXB3-208ENST00000476342 F5H5K5 113 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 J3QW42 95 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 RRP9O43818 475 aaKnown RBP25.44■■□□□ 1.66
HOXB3-208ENST00000476342 MRPL3P09001 348 aaKnown RBP25.44■■□□□ 1.66
HOXB3-208ENST00000476342 SLC15A1P46059 708 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 SNRPD2P62316 118 aaKnown RBP25.44■■□□□ 1.66
HOXB3-208ENST00000476342 TMED1Q13445 227 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 RHOUQ7L0Q8 258 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 DHRSXQ8N5I4 330 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 UBE2FQ969M7 185 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 COG8Q96MW5 612 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 LAMP5Q9UJQ1 280 aa25.44■■□□□ 1.66
HOXB3-208ENST00000476342 FBXO9Q9UK97 447 aaPredicted RBP25.44■■□□□ 1.66
HOXB3-208ENST00000476342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.44■■□□□ 1.664e-6■■■□□ 18.1
HOXB3-208ENST00000476342 SNTNA6NMZ2 147 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 TPTEP56180 551 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 SELENOVP59797 346 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 GRB2P62993 217 aaKnown RBP25.43■■□□□ 1.66
HOXB3-208ENST00000476342 POU4F2Q12837 409 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 KRTAP27-1Q3LI81 207 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 ENTHD1Q8IYW4 607 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 THEM6Q8WUY1 208 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 RNF133Q8WVZ7 376 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 CYGBQ8WWM9 190 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 TMEM14AQ9Y6G1 99 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 PMF1-BGLAPU3KQ54 211 aa25.43■■□□□ 1.66
HOXB3-208ENST00000476342 CCDC168Q8NDH2 2452 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 OVOL3O00110 214 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 NGFP01138 241 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 TUBG1P23258 451 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 EVX1P49640 407 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 ERVS71-1P61550 626 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 PPP1CBP62140 327 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 OCLNQ16625 522 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 SWI5Q1ZZU3 235 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 MRPL37Q9BZE1 423 aaKnown RBP25.42■■□□□ 1.66
HOXB3-208ENST00000476342 VCX3BQ9H321 246 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 TUBG2Q9NRH3 451 aa25.42■■□□□ 1.66
HOXB3-208ENST00000476342 TEX15Q9BXT5 2789 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 M0R135 149 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 ACSM4P0C7M7 580 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 ZNF250P15622 560 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 RSPO1Q2MKA7 263 aaPredicted RBP25.41■■□□□ 1.66
HOXB3-208ENST00000476342 MST1LQ2TV78 715 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 ZNF718Q3SXZ3 478 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 SPATC1Q76KD6 591 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 OR51G2Q8NGK0 314 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 SYNPRQ8TBG9 265 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 APOBEC3DQ96AK3 386 aaPredicted RBP25.41■■□□□ 1.66
HOXB3-208ENST00000476342 ZNF799Q96GE5 643 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 Q96MT0 163 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 MNTQ99583 582 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 KCNJ15Q99712 375 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 CACNG6Q9BXT2 260 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 ADGRL4Q9HBW9 690 aa25.41■■□□□ 1.66
HOXB3-208ENST00000476342 H3BSA7 217 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 ENTPD6O75354 484 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 ATP6V1G2O95670 118 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 ALOX5APP20292 161 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 HSD11B1P28845 292 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 GCH1P30793 250 aa25.4■■□□□ 1.66
HOXB3-208ENST00000476342 OTX1P32242 354 aaPredicted RBP25.4■■□□□ 1.66
HOXB3-208ENST00000476342 CDKN1AP38936 164 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms