RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MICAQ29983 383 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 SPRNQ5BIV9 151 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 FAM120AOSQ5T036 256 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 AVPI1Q5T686 147 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 CYB561A3Q8NBI2 242 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 DDOQ99489 341 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 CYSLTR2Q9NS75 346 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 TBC1D23Q9NUY8 699 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 MRPL22Q9NWU5 206 aaKnown RBP15.24■□□□□ 0.03
UPF3A-203ENST00000474056 CGGBP1Q9UFW8 167 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-203ENST00000474056 PURGQ9UJV8 347 aaKnown RBP15.24■□□□□ 0.03
UPF3A-203ENST00000474056 ATRQ13535 2644 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 FAM157AC9JC47 383 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 SOX14O95416 240 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 ADH4P08319 380 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 KITLGP21583 273 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 PYCR1P32322 319 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 LIPAP38571 399 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 TRAP1Q12931 704 aaKnown RBP15.23■□□□□ 0.03
UPF3A-203ENST00000474056 CR1LQ2VPA4 569 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 SLC18B1Q6NT16 456 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 CFAP77Q6ZQR2 320 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 ADGRG5Q8IZF4 528 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 ZNRF4Q8WWF5 429 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 POP5Q969H6 163 aaKnown RBP15.23■□□□□ 0.03
UPF3A-203ENST00000474056 CMBLQ96DG6 245 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 DCLRE1CQ96SD1 692 aaKnown RBP15.23■□□□□ 0.03
UPF3A-203ENST00000474056 COQ7Q99807 217 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 TSSK6Q9BXA6 273 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 DGCR6LQ9BY27 220 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 HDHD2Q9H0R4 259 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 ARMC1Q9NVT9 282 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 TREM2Q9NZC2 230 aa15.23■□□□□ 0.03
UPF3A-203ENST00000474056 IFNA2P01563 188 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 HLA-DQA2P01906 255 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 TUBG1P23258 451 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 MVKQ03426 396 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 HNRNPA0Q13151 305 aaKnown RBP15.22■□□□□ 0.03
UPF3A-203ENST00000474056 SLC36A3Q495N2 470 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 ZNF362Q5T0B9 420 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-203ENST00000474056 Q6ZR03 302 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 OR10G2Q8NGC3 310 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 OR4Q3Q8NH05 313 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 CANT1Q8WVQ1 401 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 SLC7A6OSQ96CW6 309 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-203ENST00000474056 ELMOD3Q96FG2 381 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 COG8Q96MW5 612 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 NIPSNAP1Q9BPW8 284 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 CHID1Q9BWS9 393 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 TUBG2Q9NRH3 451 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 PTTG3PQ9NZH4 202 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 ZDHHC8Q9ULC8 765 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 WIPI2Q9Y4P8 454 aa15.22■□□□□ 0.03
UPF3A-203ENST00000474056 AQP12BA6NM10 295 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CLDN25C9JDP6 229 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 J3QW42 95 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CST1P01037 141 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CD55P08174 381 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 PSKH1P11801 424 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 GGT2P36268 569 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 RPS27P42677 84 aaKnown RBP15.21■□□□□ 0.03
UPF3A-203ENST00000474056 RGS6P49758 472 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 LMO4P61968 165 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CDK5R2Q13319 367 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 HLXQ14774 488 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-203ENST00000474056 RSPO1Q2MKA7 263 aaPredicted RBP15.21■□□□□ 0.03
UPF3A-203ENST00000474056 HFEQ30201 348 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 ZMAT1Q5H9K5 638 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 LYPD4Q6UWN0 246 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 AQP12AQ8IXF9 295 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 LNX2Q8N448 690 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 PROKR2Q8NFJ6 384 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 OR51L1Q8NGJ5 315 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CCL17Q92583 94 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 PTP4A1Q93096 173 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 HAVCR1Q96D42 359 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CDADC1Q9BWV3 514 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 EGLN1Q9GZT9 426 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 PNRC2Q9NPJ4 139 aaKnown RBP15.21■□□□□ 0.03
UPF3A-203ENST00000474056 CYB5R1Q9UHQ9 305 aa15.21■□□□□ 0.03
UPF3A-203ENST00000474056 DHRS12A0PJE2 317 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 TVP23AA6NH52 213 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 B4DSR2 109 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 GYG2O15488 501 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 SRD5A1P18405 259 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 RBMXP38159 391 aaKnown RBP15.2■□□□□ 0.02
UPF3A-203ENST00000474056 TNFAIP6P98066 277 aaPredicted RBP15.2■□□□□ 0.02
UPF3A-203ENST00000474056 CRMP1Q14194 572 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 KRTAP27-1Q3LI81 207 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 DNAL1Q4LDG9 190 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 TMEM179BQ7Z7N9 219 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 OR5AS1Q8N127 324 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 OR9Q1Q8NGQ5 310 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 OR2AJ1Q8NGZ0 328 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 APOBEC3DQ96AK3 386 aaPredicted RBP15.2■□□□□ 0.02
UPF3A-203ENST00000474056 DIRC2Q96SL1 478 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 PITX2Q99697 317 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 ATF6BQ99941 703 aa15.2■□□□□ 0.02
UPF3A-203ENST00000474056 RBM4Q9BWF3 364 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms