RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 FAM98AQ8NCA5 519 aaKnown RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 SDR9C7Q8NEX9 313 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 OR4F15Q8NGB8 312 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 SMPDL3BQ92485 455 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 RASD2Q96D21 266 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 TSPAN32Q96QS1 320 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 GRHPRQ9UBQ7 328 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 ZNF346Q9UL40 294 aaKnown RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 TEX13CA0A0J9YWL9 993 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 HTR3BO95264 441 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 IGHA1P01876 353 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 CELA3AP09093 270 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 CALCRP30988 508 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 SLC35A1P78382 337 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 HNRNPA0Q13151 305 aaKnown RBP13.18□□□□□ -0.3
LMNA-213ENST00000473598 TPBGQ13641 420 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 HFEQ30201 348 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 BEND4Q6ZU67 534 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 GID4Q8IVV7 300 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 STPG2Q8N412 459 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 GATAD2BQ8WXI9 593 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 DDOQ99489 341 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 JAM3Q9BX67 310 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 HCAR1Q9BXC0 346 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 DNTTIP1Q9H147 329 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 MED20Q9H944 212 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
LMNA-213ENST00000473598 FAM74A7A6NL05 159 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 J3QRE1 110 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 HPGDSO60760 199 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 CDRT1O95170 752 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 PLGP00747 810 aaPredicted RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 IGHMP01871 453 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ITGB2P05107 769 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 NMBP08949 121 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 LGALS3BPQ08380 585 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 OPCMLQ14982 345 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ZNF239Q16600 458 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 MICBQ29980 383 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 FAM74A3Q4VXF1 159 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 PLA1AQ53H76 456 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ATRAIDQ6UW56 229 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 PCSK4Q6UW60 755 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 KDM8Q8N371 416 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 NPEPL1Q8NDH3 523 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 MRPL48Q96GC5 212 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 OR51J1Q9H342 316 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 TXNIPQ9H3M7 391 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 A0A0J9YW62 118 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 A0A1W2PNV4 684 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 RAB19A4D1S5 217 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 K7EM74 188 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ACOT7O00154 380 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 S100A9P06702 114 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 P2RY4P51582 365 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 ACKR1Q16570 336 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 MESTQ5EB52 335 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 MEPCEQ7L2J0 689 aaKnown RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 LHFPL3Q86UP9 236 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 GGNQ86UU5 652 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ZADH2Q8N4Q0 377 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 SFT2D1Q8WV19 159 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
LMNA-213ENST00000473598 ING1Q9UK53 422 aaPredicted RBP13.17□□□□□ -0.3
LMNA-213ENST00000473598 NPIPB13A6NJU9 1138 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 NPIPB4C9JG80 1138 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 TNFSF11O14788 317 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 HLA-DOBP13765 273 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 SLC2A5P22732 501 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 CD79BP40259 229 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
LMNA-213ENST00000473598 H3F3AP84243 136 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 DHODHQ02127 395 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 ZNF565Q8N9K5 539 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms