RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CACNA1CQ13936 2221 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 HCFC1P51610 2035 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TENM4Q6N022 2769 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 UNC79Q9P2D8 2635 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ABCA4P78363 2273 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 IGHV3-20A0A0C4DH32 117 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TRBV11-1A0A0K0K1C0 115 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR6C70A6NIJ9 312 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 WASHC1A8K0Z3 465 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GOLGA8KD6RF30 607 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NPIPA2E9PIF3 369 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF195O14628 629 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RIPK2O43353 540 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CDC40O60508 579 aaKnown RBP eCLIP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TPST2O60704 377 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TRIM3O75382 744 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NDUFA7O95182 113 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CLDN9O95484 217 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NUDT14O95848 222 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OTCP00480 354 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 IGKV3-11P04433 115 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PABPC4LP0CB38 370 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CCDC166P0CW27 439 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ADORA3P0DMS8 318 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RPS2P15880 293 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RPA2P15927 270 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 H2AFXP16104 143 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 KLK2P20151 261 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PRKACGP22612 351 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GLRA1P23415 457 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 EDNRAP25101 427 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 IVDP26440 423 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 MPIP34949 423 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PHBP35232 272 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OPRL1P41146 370 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ELK3P41970 407 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PPICP45877 212 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 SLC1A6P48664 564 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 EMDP50402 254 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RAP1GDS1P52306 607 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GBX2P52951 348 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PLA2G16P53816 162 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 IST1P53990 364 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CDKN2DP55273 166 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RAB8AP61006 207 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RAB10P61026 200 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RPS4XP62701 263 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 BTG2P78543 158 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 SPIBQ01892 262 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 LRRC74AQ0VAA2 488 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 FUT7Q11130 342 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 IFT88Q13099 833 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CHIT1Q13231 466 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 SLAMF1Q13291 335 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 SNTB2Q13425 540 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RIPK1Q13546 671 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CUL1Q13616 776 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 KLF5Q13887 457 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GANABQ14697 944 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TRIP10Q15642 601 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ZKSCAN8Q15776 578 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 PPP1R3AQ16821 1122 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GGTA1PQ4G0N0 100 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ACSF3Q4G176 576 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TCHHL1Q5QJ38 904 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 BEND6Q5SZJ8 279 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 SPATA46Q5T0L3 261 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 C1orf185Q5T7R7 199 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 LIPKQ5VXJ0 399 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR52E8Q6IFG1 317 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 STEAP1BQ6NZ63 245 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NIPAL3Q6P499 406 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CES3Q6UWW8 571 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 LANCL3Q6ZV70 420 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 TMEM251Q8N6I4 163 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NATD1Q8N6N6 113 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 MINDY2Q8NBR6 621 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR4K14Q8NGD5 310 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR52B6Q8NGF0 335 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR5T3Q8NGG3 340 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR1J4Q8NGS1 313 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF721Q8TF20 911 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NAT14Q8WUY8 206 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 CCDC126Q96EE4 140 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GMPPAQ96IJ6 420 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 C18orf12Q96KH6 178 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF597Q96LX8 424 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 VSTM2LQ96N03 204 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 DUX3Q96PT4 197 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ALKBH3Q96Q83 286 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 GPR22Q99680 433 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NPAS2Q99743 824 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NAPGQ99747 312 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 NRTNQ99748 197 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 ERP44Q9BS26 406 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 DOHHQ9BU89 302 aa2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RBM4Q9BWF3 364 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 RBM24Q9BX46 236 aaKnown RBP2.14□□□□□ -2.07
UBXN4-206ENST00000470687 OR8D2Q9GZM6 311 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms