RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 NKPD1Q17RQ9 610 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 PRSS42Q7Z5A4 293 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-212ENST00000466410 CDH26Q8IXH8 852 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 APCDD1LQ8NCL9 501 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 STT3BQ8TCJ2 826 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 CNTD2Q9H8S5 307 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 MED9Q9NWA0 146 aa17.28■□□□□ 0.36
LIMS2-212ENST00000466410 PHF3Q92576 2039 aaKnown RBP17.27■□□□□ 0.36
LIMS2-212ENST00000466410 RFPL4AA6NLU0 287 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 RFPL4AL1F8VTS6 287 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 AQP8O94778 261 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 SPDEFO95238 335 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 LIPCP11150 499 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 ZP3P21754 424 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 CARFQ8N187 725 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 STEAP2Q8NFT2 490 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 ST8SIA1Q92185 356 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.36
LIMS2-212ENST00000466410 A0A0A6YYH2 397 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 A6NJ64 397 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 H3BML4 177 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 SRFP11831 508 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 C17orf67Q0P5P2 114 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 DHRS2Q13268 280 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 TUSC1Q2TAM9 212 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 PAPD4Q6PIY7 484 aaKnown RBP17.27■□□□□ 0.35
LIMS2-212ENST00000466410 CD163Q86VB7 1156 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 MISPQ8IVT2 679 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 CADM4Q8NFZ8 388 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 RNF133Q8WVZ7 376 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 C5orf34Q96MH7 638 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 EDEM2Q9BV94 578 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 CHRDQ9H2X0 955 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 CHST11Q9NPF2 352 aa17.27■□□□□ 0.35
LIMS2-212ENST00000466410 ASCC3Q8N3C0 2202 aaKnown RBP17.27■□□□□ 0.35
LIMS2-212ENST00000466410 EXPH5Q8NEV8 1989 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 RAB27BO00194 218 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 UBCP0CG48 685 aaKnown RBP17.26■□□□□ 0.35
LIMS2-212ENST00000466410 MPGP29372 298 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 FOXF1Q12946 379 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 PXDC1Q5TGL8 231 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 DEGS2Q6QHC5 323 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 ZNF813Q6ZN06 617 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 ZNF584Q8IVC4 421 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 PAQR4Q8N4S7 273 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-212ENST00000466410 OR6S1Q8NH40 331 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 SEMA5BQ9P283 1151 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 LGALS8O00214 317 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 TTRP02766 147 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 MMP16P51512 607 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 UBXN2BQ14CS0 331 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 BEST3Q8N1M1 668 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 SLC25A45Q8N413 288 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 OR52N4Q8NGI2 321 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 OR6K3Q8NGY3 331 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 C11orf40Q8WZ69 217 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 AQP3Q92482 292 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 FAM46BQ96A09 425 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 PTX4Q96A99 478 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 ADAT3Q96EY9 351 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-212ENST00000466410 FAM206AQ9NX38 181 aa17.26■□□□□ 0.35
LIMS2-212ENST00000466410 ATXN7L1Q9ULK2 861 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-212ENST00000466410 WDR87Q6ZQQ6 2873 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 LOC100509620A0A075B734 347 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 RLN2P04090 185 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 HOXD4P09016 255 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-212ENST00000466410 NUP62P37198 522 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-212ENST00000466410 GNALP38405 381 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 APOBEC1P41238 236 aaKnown RBP17.25■□□□□ 0.35
LIMS2-212ENST00000466410 ZNF260Q3ZCT1 412 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 ZNF546Q86UE3 836 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 FJX1Q86VR8 437 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 GVQW1Q8N7I0 195 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 OR5M9Q8NGP3 310 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 SLAMF6Q96DU3 332 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 FOXQ1Q9C009 403 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 PTGES2Q9H7Z7 377 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 MYOZ1Q9NP98 299 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-212ENST00000466410 PFDN2Q9UHV9 154 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 VSIG4Q9Y279 399 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 OR14I1A6ND48 311 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 GLB1P16278 677 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 RAB6AP20340 208 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 BDKRB2P30411 391 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 BIDP55957 195 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 UNC119Q13432 240 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 SLC22A6Q4U2R8 563 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 CLVS2Q5SYC1 327 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 SPERTQ8NA61 448 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 OR1S1Q8NH92 325 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 ASB13Q8WXK3 278 aa17.25■□□□□ 0.35
LIMS2-212ENST00000466410 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-212ENST00000466410 TRIOBPQ9H2D6 2365 aa17.24■□□□□ 0.35
LIMS2-212ENST00000466410 RALGAPA1Q6GYQ0 2036 aa17.24■□□□□ 0.35
LIMS2-212ENST00000466410 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.24■□□□□ 0.35
LIMS2-212ENST00000466410 EFNA2O43921 213 aa17.24■□□□□ 0.35
LIMS2-212ENST00000466410 NAGAP17050 411 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms