RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNRF4Q8WWF5 429 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 CCDC124Q96CT7 223 aaKnown RBP18.47■□□□□ 0.55
LIME1-203ENST00000465591 CMBLQ96DG6 245 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 MRPL22Q9NWU5 206 aaKnown RBP18.47■□□□□ 0.55
LIME1-203ENST00000465591 DCAF16Q9NXF7 216 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 PRPF19Q9UMS4 504 aaKnown RBP18.47■□□□□ 0.55
LIME1-203ENST00000465591 WIPI2Q9Y4P8 454 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 U3KQV3 271 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 STAB1Q9NY15 2570 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 CCNB2O95067 398 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 GSTM3P21266 225 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 KITLGP21583 273 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 DVL1P1P54792 670 aaPredicted RBP18.46■□□□□ 0.55
LIME1-203ENST00000465591 TEKQ02763 1124 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 CDK5R2Q13319 367 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 OR2T5Q6IEZ7 315 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 SLC18B1Q6NT16 456 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 PGM2L1Q6PCE3 622 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 AQP11Q8NBQ7 271 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 GJC3Q8NFK1 279 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 OR2T29Q8NH02 315 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 ELMOD3Q96FG2 381 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 CYSLTR2Q9NS75 346 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 IL20Q9NYY1 176 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 ATPIF1Q9UII2 106 aa18.46■□□□□ 0.55
LIME1-203ENST00000465591 TMEFF2Q9UIK5 374 aaPredicted RBP18.46■□□□□ 0.55
LIME1-203ENST00000465591 B4DSR2 109 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 ACOT8O14734 319 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 PHF1O43189 567 aaPredicted RBP18.45■□□□□ 0.54
LIME1-203ENST00000465591 CD55P08174 381 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 PYCR1P32322 319 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 GGT2P36268 569 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 LIPAP38571 399 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 CBX1P83916 185 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 SRSF2Q01130 221 aaKnown RBP18.45■□□□□ 0.54
LIME1-203ENST00000465591 HLXQ14774 488 aaPredicted RBP18.45■□□□□ 0.54
LIME1-203ENST00000465591 HFEQ30201 348 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 KRTAP27-1Q3LI81 207 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 LYPD4Q6UWN0 246 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 RASSF6Q6ZTQ3 369 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 OR4Q3Q8NH05 313 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 CCL17Q92583 94 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 HAVCR1Q96D42 359 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 ASB9Q96DX5 294 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 COQ7Q99807 217 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 HDHD2Q9H0R4 259 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 PTTG3PQ9NZH4 202 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 CGGBP1Q9UFW8 167 aaPredicted RBP18.45■□□□□ 0.54
LIME1-203ENST00000465591 ZDHHC8Q9ULC8 765 aa18.45■□□□□ 0.54
LIME1-203ENST00000465591 CLDN25C9JDP6 229 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 DEAF1O75398 565 aaPredicted RBP18.44■□□□□ 0.54
LIME1-203ENST00000465591 PSKH1P11801 424 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 ADGRG5Q8IZF4 528 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 LINC00471Q8N535 108 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 OR52L1Q8NGH7 329 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 DCLRE1CQ96SD1 692 aaKnown RBP18.44■□□□□ 0.54
LIME1-203ENST00000465591 THTPAQ9BU02 230 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 C1orf21Q9H246 121 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 PNRC2Q9NPJ4 139 aaKnown RBP18.44■□□□□ 0.54
LIME1-203ENST00000465591 CYB5R1Q9UHQ9 305 aa18.44■□□□□ 0.54
LIME1-203ENST00000465591 SAMHD1Q9Y3Z3 626 aaKnown RBP18.44■□□□□ 0.54
LIME1-203ENST00000465591 RNF212BA8MTL3 300 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 SOX14O95416 240 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 MSMBP08118 114 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 HNF1AP20823 631 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 TUBG1P23258 451 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 RPS27P42677 84 aaKnown RBP18.43■□□□□ 0.54
LIME1-203ENST00000465591 TNFAIP6P98066 277 aaPredicted RBP18.43■□□□□ 0.54
LIME1-203ENST00000465591 MICAQ29983 383 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 FAM98BQ52LJ0 330 aaKnown RBP18.43■□□□□ 0.54
LIME1-203ENST00000465591 RPL13AP3Q6NVV1 102 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 OR5AS1Q8N127 324 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 SLC37A3Q8NCC5 494 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 PTP4A1Q93096 173 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 TMEM186Q96B77 213 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 EGLN1Q9GZT9 426 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 ZNF665Q9H7R5 613 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 REEP1Q9H902 201 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 TUBG2Q9NRH3 451 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 TBC1D23Q9NUY8 699 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 HIF1ANQ9NWT6 349 aa18.43■□□□□ 0.54
LIME1-203ENST00000465591 TVP23AA6NH52 213 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 ATP5HO75947 161 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 HLA-DQA2P01906 255 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 RAC2P15153 192 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 PRSS12P56730 875 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 ZMAT1Q5H9K5 638 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 OR2T2Q6IF00 324 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 FBXW12Q6X9E4 464 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 COLCA1Q6ZS62 124 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 ZNF771Q7L3S4 317 aaPredicted RBP18.42■□□□□ 0.54
LIME1-203ENST00000465591 NAA40Q86UY6 237 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 GLCCI1Q86VQ1 547 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 PHC2Q8IXK0 858 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 LNX2Q8N448 690 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 OR2Z1Q8NG97 314 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 OR51L1Q8NGJ5 315 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 OR10S1Q8NGN2 331 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 OR9Q1Q8NGQ5 310 aa18.42■□□□□ 0.54
LIME1-203ENST00000465591 MAP6Q96JE9 813 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms