RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CTLA4P16410 223 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF823P16415 610 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 EDNRAP25101 427 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 CEACAM8P31997 349 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SDC2P34741 201 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 PPP5CP53041 499 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 BIDP55957 195 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 CLRN1P58418 232 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 H3F3AP84243 136 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ROM1Q03395 351 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SLC3A1Q07837 685 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 RASGEF1BQ0VAM2 473 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 HNRNPA0Q13151 305 aaKnown RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 PDSS1Q5T2R2 415 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 FDX2Q6P4F2 183 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ESPNLQ6ZVH7 1005 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 GLB1L2Q8IW92 636 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 RFLNBQ8N5W9 214 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 YIPF7Q8N8F6 280 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 GHSRQ92847 366 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 DNAJA3Q96EY1 480 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SH3GL3Q99963 347 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SF3B5Q9BWJ5 86 aaKnown RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 RERGLQ9H628 205 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF703Q9H7S9 590 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ACOXLQ9NUZ1 547 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SIRT4Q9Y6E7 314 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 TRAV1-2A0A0B4J238 106 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ANKRD61A6NGH8 418 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 TVP23AA6NH52 213 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF726A6NNF4 738 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 EEF1E1-BLOC1S5C9J1V9 151 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 E9PI62 339 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF593O00488 134 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-215ENST00000465457 EEF1E1O43324 174 aaKnown RBP12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF254O75437 659 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ABHD16AO95870 558 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 GABRA1P14867 456 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 HCCSP53701 268 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 B3GALT5-AS1P59052 145 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 RAC3P60763 192 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 TOMM20Q15388 145 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 PCK2Q16822 640 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 HYAL4Q2M3T9 481 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM91Q6ZNR0 172 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 CEACAM19Q7Z692 300 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 SLC26A10Q8NG04 563 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 OR5M1Q8NGP8 315 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 INTS12Q96CB8 462 aaKnown RBP12.16□□□□□ -0.46
HDAC6-215ENST00000465457 SFXN2Q96NB2 322 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 OR8B4Q96RC9 309 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 SLC30A2Q9BRI3 323 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 MROQ9BYG7 248 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 BARHL1Q9BZE3 327 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 COMMD4Q9H0A8 199 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 QPCTLQ9NXS2 382 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ADAM30Q9UKF2 790 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 IKZF2Q9UKS7 526 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF281Q9Y2X9 895 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 CMAHPQ9Y471 501 aa12.16□□□□□ -0.46
HDAC6-215ENST00000465457 CD8B2A6NJW9 211 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM212A6NML5 194 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 SPARCP09486 303 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 PGA4P0DJD7 388 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 PGA3P0DJD8 388 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 CD8BP10966 210 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 TCEA1P23193 301 aaKnown RBP12.15□□□□□ -0.46
HDAC6-215ENST00000465457 GDF1P27539 372 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 CCR9P51686 369 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 PPP3R1P63098 170 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 MXD1Q05195 221 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 SLC10A1Q14973 349 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF181Q2M3W8 571 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 ACSM3Q53FZ2 586 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 CCDC190Q86UF4 302 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 GPAT4Q86UL3 456 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF679Q8IYX0 411 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 MINDY2Q8NBR6 621 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 MAPK1IP1LQ8NDC0 245 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 FAM83FQ8NEG4 500 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-215ENST00000465457 OR10H5Q8NGA6 315 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 OR52N5Q8NH56 324 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 SMAP2Q8WU79 429 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-215ENST00000465457 MED29Q9NX70 200 aa12.15□□□□□ -0.46
HDAC6-215ENST00000465457 MRM2Q9UI43 246 aaKnown RBP12.15□□□□□ -0.46
HDAC6-215ENST00000465457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.463e-6■□□□□ 11
HDAC6-215ENST00000465457 ISPDA4D126 451 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms