RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ELMOD3Q96FG2 381 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 RBM4Q9BWF3 364 aaKnown RBP13.87□□□□□ -0.19
SSNA1-204ENST00000464553 PLA2G12AQ9BZM1 189 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 NMNAT2Q9BZQ4 307 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 ZNF556Q9HAH1 456 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 STARD10Q9Y365 291 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 ABCA1O95477 2261 aa13.87□□□□□ -0.19
SSNA1-204ENST00000464553 FN1P02751 2386 aaKnown RBP13.86□□□□□ -0.19
SSNA1-204ENST00000464553 IGHV1-69-2A0A0G2JMI3 117 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 LMX1BO60663 402 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 NCR1O76036 304 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 FMO3P31513 532 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 PPP1R8Q12972 351 aaKnown RBP13.86□□□□□ -0.19
SSNA1-204ENST00000464553 PCK2Q16822 640 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 HFEQ30201 348 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 KRTAP27-1Q3LI81 207 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 SPATA46Q5T0L3 261 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 SLC37A3Q8NCC5 494 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 PROKR2Q8NFJ6 384 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 OR8D4Q8NGM9 314 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 TEX47Q8TBZ9 253 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 CADM1Q9BY67 442 aaKnown RBP13.86□□□□□ -0.19
SSNA1-204ENST00000464553 SAP30LQ9HAJ7 183 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 CMC2Q9NRP2 79 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 ZNF275Q9NSD4 429 aaPredicted RBP13.86□□□□□ -0.19
SSNA1-204ENST00000464553 PURGQ9UJV8 347 aaKnown RBP13.86□□□□□ -0.19
SSNA1-204ENST00000464553 ZANQ9Y493 2812 aa13.86□□□□□ -0.19
SSNA1-204ENST00000464553 ZFHX3Q15911 3703 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 RTTNQ86VV8 2226 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 LOC100289279A0A1B0GTE1 492 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 LYNX1G3V0Z9 82 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 SURF4O15260 269 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 TPD52L2O43399 206 aaKnown RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 TIMM8AO60220 97 aaPredicted RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 FKBP6O75344 327 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 IFNA2P01563 188 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 IGHV1-46P01743 117 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 LYNX1P0DP58 116 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 ZNF3P17036 446 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 PCMT1P22061 227 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 TNFSF4P23510 183 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 GRK5P34947 590 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 MEP1BQ16820 701 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 RSPO1Q2MKA7 263 aaPredicted RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 ALKBH6Q3KRA9 238 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 SLC27A4Q6P1M0 643 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 RHOUQ7L0Q8 258 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 LINC01356Q8N9X3 169 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 YIPF5Q969M3 257 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 CMBLQ96DG6 245 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 MSI2Q96DH6 328 aaKnown RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 PITX2Q99697 317 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 ATF6BQ99941 703 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 C1QTNF5Q9BXJ0 243 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 MRPL22Q9NWU5 206 aaKnown RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 PDP1Q9P0J1 537 aaPredicted RBP13.85□□□□□ -0.19
SSNA1-204ENST00000464553 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
SSNA1-204ENST00000464553 IFNL4K9M1U5 179 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 DEAF1O75398 565 aaPredicted RBP13.84□□□□□ -0.19
SSNA1-204ENST00000464553 E2F6O75461 281 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 TGFAP01135 160 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 HMGN1P05114 100 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 ANPEPP15144 967 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 SELEP16581 610 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 THBS2P35442 1172 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 TPTEP56180 551 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 CBX1P83916 185 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 CORO6Q6QEF8 472 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 USP51Q70EK9 711 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 RAB1CQ92928 201 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 SPTSSAQ969W0 71 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 TIMD4Q96H15 378 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 TEX12Q9BXU0 123 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
SSNA1-204ENST00000464553 ZSCAN5BA6NJL1 495 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 B4DSR2 109 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 H3BN98 237 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 PPIHO43447 177 aaKnown RBP13.83□□□□□ -0.2
SSNA1-204ENST00000464553 SPRY3O43610 288 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 GPANK1O95872 356 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 ACSM4P0C7M7 580 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 OSMP13725 252 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 TNFRSF1AP19438 455 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 PAICSP22234 425 aaKnown RBP13.83□□□□□ -0.2
SSNA1-204ENST00000464553 CRMP1Q14194 572 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 OR4Q3Q8NH05 313 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 SLC7A6Q92536 515 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 HCAR1Q9BXC0 346 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 BEX2Q9BXY8 128 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 PNRC2Q9NPJ4 139 aaKnown RBP13.83□□□□□ -0.2
SSNA1-204ENST00000464553 DDX28Q9NUL7 540 aaKnown RBP13.83□□□□□ -0.2
SSNA1-204ENST00000464553 IL19Q9UHD0 177 aa13.83□□□□□ -0.2
SSNA1-204ENST00000464553 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
SSNA1-204ENST00000464553 LRP5LA4QPB2 252 aa13.82□□□□□ -0.2
SSNA1-204ENST00000464553 CLDN25C9JDP6 229 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms