RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 KLHL26Q53HC5 615 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 IGSF11Q5DX21 431 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 VAX1Q5SQQ9 334 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CORO6Q6QEF8 472 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TMEM184AQ6ZMB5 413 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF600Q6ZNG1 722 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 VN1R4Q7Z5H5 301 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TRAPPC6BQ86SZ2 158 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 NAA40Q86UY6 237 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 OOSP2Q86WS3 158 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 SULF2Q8IWU5 870 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ARHGEF39Q8N4T4 335 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 FRMD1Q8N878 549 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 OR52R1Q8NGF1 315 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 FGF13Q92913 245 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 INTS12Q96CB8 462 aaKnown RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 RASD2Q96D21 266 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 C14orf79Q96F83 325 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 C2orf50Q96LR7 162 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PTCHD1Q96NR3 888 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 DMRTA2Q96SC8 542 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ZFYVE21Q9BQ24 234 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CMSS1Q9BQ75 279 aaKnown RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 NUDT9Q9BW91 350 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TINAGL1Q9GZM7 467 aaPredicted RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CHST6Q9GZX3 395 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 S1PR5Q9H228 398 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 FBRSQ9HAH7 460 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 BCO1Q9HAY6 547 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PLEKHA2Q9HB19 425 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 IL21RQ9HBE5 538 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 ZDHHC4Q9NPG8 344 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 LUZP4Q9P127 313 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 CCL26Q9Y258 94 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 FARSAQ9Y285 508 aaKnown RBP6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 PRKAB1Q9Y478 270 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 WNT6Q9Y6F9 365 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 MYOFQ9NZM1 2061 aa6.46□□□□□ -1.38
CLSTN1-204ENST00000464286 TICRRQ7Z2Z1 1910 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 C13orf42A0A1B0GVH6 325 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 A0A1W2PPC1 479 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 MEX3AA1L020 520 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ZNF729A6NN14 1252 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 CEACAM18A8MTB9 384 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 EEF1E1-BLOC1S5C9J1V9 151 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 C4orf51C9J302 202 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SCDO00767 359 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 LDLRAD4O15165 306 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 LATO43561 262 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 MED6O75586 246 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SFT2D2O95562 160 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 TSPAN15O95858 294 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ACTL6AO96019 429 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 PLGP00747 810 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 IFNA21P01568 189 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 HLA-DQA2P01906 255 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 RHOP08100 348 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ITGA5P08648 1049 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 TMIGD3P0DMS9 266 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 IGFBP3P17936 291 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ADCYAP1P18509 176 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 NME2P22392 152 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 CXCR1P25024 350 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 PTGER1P34995 402 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SERPINF1P36955 418 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 CDKN2AP42771 156 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 CLDN2P57739 230 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SNRPEP62304 92 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 RPS15P62841 145 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 FAM3AP98173 230 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 DEFA6Q01524 100 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 PLA2G7Q13093 441 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 RUNX2Q13950 521 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 HABP2Q14520 560 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 MELKQ14680 651 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SGCAQ16586 387 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 WDR38Q5JTN6 314 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 GLYATL3Q5SZD4 288 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 UNQ6126/PRO20091Q6UXV3 157 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 KCTD9Q7L273 389 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 FJX1Q86VR8 437 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 HOGA1Q86XE5 327 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 CACUL1Q86Y37 369 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC22A24Q8N4F4 322 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 JAGN1Q8N5M9 183 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 OR13C3Q8NGS6 347 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 OR13C8Q8NGS7 320 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 OR10R2Q8NGX6 335 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 TERB2Q8NHR7 220 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ZCCHC10Q8TBK6 192 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 TMED6Q8WW62 240 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC25A28Q96A46 364 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 C3orf49Q96BT1 292 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 RAB3CQ96E17 227 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 ZDHHC12Q96GR4 267 aa6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SLC25A44Q96H78 314 aaPredicted RBP6.45□□□□□ -1.38
CLSTN1-204ENST00000464286 SEC22AQ96IW7 307 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms