RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 HSD17B1P14061 328 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 ZFP36P26651 326 aaKnown RBP12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 BTG1P62324 171 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 LCN2P80188 198 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 RFX4Q33E94 735 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 FAM86B1Q8N7N1 296 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 OR52J3Q8NH60 311 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC7A6Q92536 515 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 PYURFQ96I23 114 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 SIGLEC11Q96RL6 698 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 GPA33Q99795 319 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 COQ7Q99807 217 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 IL20RAQ9UHF4 553 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 TMEM89A2RUT3 159 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 ATP8B1O43520 1251 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 IDH3BO43837 385 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 DIRAS1O95057 198 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 DBHP09172 617 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 ADRA2CP18825 462 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 FPR3P25089 353 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 FPR2P25090 351 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC6A6P31641 620 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC6A9P48067 706 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 COX10Q12887 443 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 C1orf94Q6P1W5 598 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 MUC20Q8N307 709 aaPredicted RBP12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 BPIFB2Q8N4F0 458 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 OR13G1Q8NGZ3 307 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 POP5Q969H6 163 aaKnown RBP12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 ERMAPQ96PL5 475 aaPredicted RBP12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 POLR1DQ9Y2S0 133 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 LHFPL6Q9Y693 200 aa12.1□□□□□ -0.47
SNRNP40-203ENST00000463988 A8MXK9 166 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 F5H0A9 414 aaPredicted RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 TMEM178BH3BS89 294 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 DCTN6O00399 190 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 SNX3O60493 162 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 GADD45GO95257 159 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 FSTL3O95633 263 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 PPP1R3DO95685 299 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 RENP00797 406 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 CFPP27918 469 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 IFNGR2P38484 337 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 MDH2P40926 338 aaKnown RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ERFP50548 548 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ACTG1P63261 375 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ECH1Q13011 328 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ZMYND11Q15326 602 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 KRTAP27-1Q3LI81 207 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC36A3Q495N2 470 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 OTPQ5XKR4 325 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 RNF148Q8N7C7 305 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 DEFB108BQ8NET1 73 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC26A10Q8NG04 563 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 FANK1Q8TC84 345 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 ZNF582Q96NG8 517 aaPredicted RBP12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 TSSK2Q96PF2 358 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 OR52D1Q9H346 318 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 NTN4Q9HB63 628 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 GCM1Q9NP62 436 aa12.09□□□□□ -0.47
SNRNP40-203ENST00000463988 MGAM2Q2M2H8 2515 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 A0A1B0GWJ7 208 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 IQCF6A8MYZ5 107 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 RGS9O75916 674 aaPredicted RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SELEP16581 610 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF12P17014 697 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 CENPAP49450 140 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 MMP16P51512 607 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SPIBQ01892 262 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 MEP1BQ16820 701 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF181Q2M3W8 571 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SPATS1Q496A3 300 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SAMD4BQ5PRF9 694 aaKnown RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 LEG1Q6P5S2 330 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 ZBTB46Q86UZ6 589 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 PGAM4Q8N0Y7 254 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 GCDHQ92947 438 aaPredicted RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 MEGF10Q96KG7 1140 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 NMNAT3Q96T66 252 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms