RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TSPAN19P0C672 248 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 THRBP10828 461 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PSKH1P11801 424 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ITGA2P17301 1181 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CRYGSP22914 178 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CHMP24386 653 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CXCR1P25024 350 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SLC9A3P48764 834 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FAM3BP58499 235 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 COPZ1P61923 177 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 LCN6P62502 163 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RPS4XP62701 263 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RPP38P78345 283 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 IL1RL1Q01638 556 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RPL18Q07020 188 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SELENBP1Q13228 472 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MELKQ14680 651 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MS4A18Q3C1V0 323 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SLC36A3Q495N2 470 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CLEC12AQ5QGZ9 265 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 C6orf52Q5T4I8 152 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EEF1A1P5Q5VTE0 462 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TTC33Q6PID6 262 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZBTB49Q6ZSB9 765 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMPRSS11FQ6ZWK6 438 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 OR10D3Q8NH80 312 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ABHD3Q8WU67 409 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 DNAJA4Q8WW22 397 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SGCDQ92629 289 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SLC25A36Q96CQ1 311 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RASD2Q96D21 266 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 BPIFA2Q96DR5 249 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SGTBQ96EQ0 304 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TXNDC15Q96J42 360 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SAMD8Q96LT4 415 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 KLHL15Q96M94 604 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TUBA1CQ9BQE3 449 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PSD2Q9BQI7 771 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM204Q9BSN7 226 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM43Q9BTV4 400 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 HCAR1Q9BXC0 346 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 DGCR6LQ9BY27 220 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 OR52D1Q9H346 318 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FN3KQ9H479 309 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RIBC2Q9H4K1 309 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM160Q9NX00 188 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MED29Q9NX70 200 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TAS2R5Q9NYW4 299 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 USE1Q9NZ43 259 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RPS6KB2Q9UBS0 482 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CLEC4AQ9UMR7 237 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SIGLEC7Q9Y286 467 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.13□□□□□ -1.919e-7■■■■■ 35.8
SCFD1-204ENST00000463622 MGAM2Q2M2H8 2515 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PKD1L1Q8TDX9 2849 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CHD3Q12873 2000 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FREM3P0C091 2139 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 A0A087WZY1 265 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF716A6NP11 495 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 A8MVM7 634 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EFCAB9A8MZ26 197 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EEF1E1-BLOC1S5C9J1V9 151 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 C11orf98E9PRG8 122 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 DCTN6O00399 190 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PLPP3O14495 311 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 BHLHE40O14503 412 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 EEF1E1O43324 174 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF208O43345 1280 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TRAF3IP2O43734 574 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SERPINI2O75830 405 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 AHSA1O95433 338 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ADAP00813 363 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ACAA1P09110 424 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TFPIP10646 304 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CLUP10909 449 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 FCGR1AP12314 374 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 CPN1P15169 458 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF17P17021 662 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 IGFBP5P24593 272 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ELK4P28324 431 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 GCKP35557 465 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 APOBEC1P41238 236 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RBM34P42696 430 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ALDH3A2P51648 485 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ATP5J2P56134 94 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 OR2B6P58173 313 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RPL15P61313 204 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ERVK-25P63136 954 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ADARB1P78563 741 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 H3F3AP84243 136 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TSPAN31Q12999 210 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SNCBQ16143 134 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF239Q16600 458 aaKnown RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ZSWIM7Q19AV6 140 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MESTQ5EB52 335 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PHYHD1Q5SRE7 291 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms