RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 NSG1A0A0A6YYJ2 146 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 F5H5P2 479 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 H0YC42 278 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 H3BUI4 141 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 LRP3O75074 770 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 IGHEP01854 428 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 ITGA5P08648 1049 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 CD63P08962 238 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 RPA2P15927 270 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 FSTP19883 344 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 PRSS3P35030 304 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 MAP2K6P52564 334 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 EFNB2P52799 333 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 RAB11BQ15907 218 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 NDUFAF7Q7L592 441 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 MUC20Q8N307 709 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-204ENST00000461897 OR51D1Q8NGF3 324 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 OR52B4Q8NGK2 314 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 SLC25A28Q96A46 364 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-204ENST00000461897 NPAS1Q99742 590 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 SYT4Q9H2B2 425 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 KLRF1Q9NZS2 232 aa11.11□□□□□ -0.63
COL4A6-204ENST00000461897 TRAV36DV7A0A075B6V5 113 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 A0A0A6YYH2 397 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ANKUB1A6NFN9 424 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 A6NJ64 397 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 H7C1C5 153 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 DOK2O60496 412 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 WNT11O96014 354 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 MT-ATP6P00846 226 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 IGHMP01871 453 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 CXCR1P25024 350 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 OTX2P32243 289 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 POLR2HP52434 150 aaKnown RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ACTBP60709 375 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 LCN6P62502 163 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ACTG1P63261 375 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 C2orf68Q2NKX9 166 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 C2orf76Q3KRA6 126 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 C1QL3Q5VWW1 255 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 OR5M1Q8NGP8 315 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 LHFPL5Q8TAF8 219 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 AMELYQ99218 206 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SHARPINQ9H0F6 387 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SLCO5A1Q9H2Y9 848 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 VSX1Q9NZR4 365 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 MED11Q9P086 117 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 B9D1Q9UPM9 204 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 CHCHD2Q9Y6H1 151 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 KNTC1P50748 2209 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 TMED7-TICAM2A0A0A6YYA0 188 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 TMEM272A0A1B0GTI8 110 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 NPIPB7O75200 414 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 PMS2P2O95744 297 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 FGF2P09038 288 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 IGFBP3P17936 291 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 PRKACBP22694 351 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SUMO3P55854 103 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 GMFBP60983 142 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SGCBQ16585 318 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 OR7E24Q6IFN5 339 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ARSKQ6UWY0 536 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 HSD17B13Q7Z5P4 300 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 DEFB124Q8NES8 71 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 AHCTF1Q8WYP5 2266 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SLC25A21Q9BQT8 299 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 PTDSS2Q9BVG9 487 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 METTL7AQ9H8H3 244 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 ELOVL3Q9HB03 270 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 UPB1Q9UBR1 384 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 GLS2Q9UI32 602 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 KCNG2Q9UJ96 466 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 FARSAQ9Y285 508 aaKnown RBP11.1□□□□□ -0.63
COL4A6-204ENST00000461897 TMED7Q9Y3B3 224 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 WIF1Q9Y5W5 379 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 SESN1Q9Y6P5 492 aa11.1□□□□□ -0.63
COL4A6-204ENST00000461897 EML6Q6ZMW3 1958 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 TRAV18A0A075B6X5 111 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 IGLV1-36A0A0B4J1U3 117 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 PRSS37A4D1T9 235 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 TERTO14746 1132 aaKnown RBP11.09□□□□□ -0.63
COL4A6-204ENST00000461897 LDLRAD4O15165 306 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 ARPC5O15511 151 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF35P13682 527 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 GTF2F2P13984 249 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 MPGP29372 298 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms