RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CSNK1A1LQ8N752 337 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 OR5AP2Q8NGF4 316 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 OR5D16Q8NGK9 328 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 OR13C8Q8NGS7 320 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 TERB2Q8NHR7 220 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 MAFAQ8NHW3 353 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-218ENST00000456174 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 CCDC3Q9BQI4 270 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 MRI1Q9BV20 369 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 SYT4Q9H2B2 425 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 C1orf198Q9H425 327 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 FN3KRPQ9HA64 309 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 FAM60AQ9NP50 221 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 A4GALTQ9NPC4 353 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 STARD5Q9NSY2 213 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 ZCCHC3Q9NUD5 404 aaKnown RBP6.89□□□□□ -1.31
HDAC9-218ENST00000456174 DAPP1Q9UN19 280 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
HDAC9-218ENST00000456174 NINQ8N4C6 2090 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SYNDIG1LA6NDD5 238 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ZNF860A6NHJ4 632 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR2AT4A6NND4 320 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 C9J4A7 227 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 F5H0A9 414 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 FFAR1O14842 300 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 HCRTR1O43613 425 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 CTNSO60931 367 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OPN1LWP04000 364 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SOD3P08294 240 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 UCHL1P09936 223 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ATF1P18846 271 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 GABRR1P24046 479 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ELAVL4P26378 380 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TLX1P31314 330 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 AKR1C3P42330 323 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 CAPZBP47756 277 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 AFF3P51826 1226 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PRKAG1P54619 331 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 EGR3Q06889 387 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TRA2AQ13595 282 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 HAGHQ16775 308 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 DEFB110Q30KQ9 67 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 RPS26P11Q5JNZ5 115 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TMEM64Q6YI46 380 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 LINGO2Q7L985 606 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PRSS41Q7RTY9 318 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 DCXRQ7Z4W1 244 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 C17orf82Q86X59 251 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 BEST3Q8N1M1 668 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR4D9Q8NGE8 314 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SLC7A13Q8TCU3 470 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SFXN5Q8TD22 340 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 RNASEH2CQ8TDP1 164 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TNFAIP8L1Q8WVP5 186 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 MOAP1Q96BY2 351 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 RRNAD1Q96FB5 475 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PIK3IP1Q96FE7 263 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TMEM19Q96HH6 336 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ZNF681Q96N22 645 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ACTR3CQ9C0K3 210 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR51I1Q9H343 314 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TRPC4Q9UBN4 977 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 LPAR3Q9UBY5 353 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR14J1Q9UGF5 321 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 CACNA1IQ9P0X4 2223 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TMEM269A0A1B0GVZ9 245 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR5H14A6NHG9 310 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 LILRA5A6NI73 299 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PHOX2AO14813 284 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PIAS2O75928 621 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 IL33O95760 270 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 IL18BPO95998 194 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 IFNW1P05000 195 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 HMGN2P05204 90 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 SNRNP70P08621 437 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 FCGR3AP08637 254 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 GALNSP34059 522 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 GIPRP48546 466 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 MEF2DQ14814 521 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OGFOD3Q6PK18 319 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 DNM1P46Q6ZS02 220 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 PAQR4Q8N4S7 273 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ACBD4Q8NC06 268 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR4K14Q8NGD5 310 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 OR56A1Q8NGH5 318 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 NUBPLQ8TB37 319 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 DUSP19Q8WTR2 217 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 APOBEC4Q8WW27 367 aaKnown RBP6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 GAL3ST4Q96RP7 486 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 LYRM4Q9HD34 91 aa6.88□□□□□ -1.31
HDAC9-218ENST00000456174 TMEM74BQ9NUR3 256 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 273.2 ms