RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 POFUT2Q9Y2G5 429 aa4.58□□□□□ -1.68
HMGB1P4-201ENST00000455362 CHCHD2Q9Y6H1 151 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P4-201ENST00000455362 SVILO95425 2214 aa4.58□□□□□ -1.68
HMGB1P4-201ENST00000455362 ACACBO00763 2458 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CFAP47Q6ZTR5 3102 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 NCKAP5O14513 1909 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 A0A087WUJ7 227 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 LOC100130705A0A1B0GUX0 176 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 SLC22A23A1A5C7 686 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZNF716A6NP11 495 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 LINC00473A8K010 186 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PRSS46E5RG02 174 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 NPIPB6E9PJ23 425 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 AKAP8O43823 692 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 S100A9P06702 114 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 IGFBP1P08833 259 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZNF735P0CB33 412 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CCL3P10147 92 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PRKAR1AP10644 381 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PNMTP11086 282 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 GP1BBP13224 206 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PGCP20142 388 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 GSTM3P21266 225 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 RBM34P42696 430 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 OR3A1P47881 315 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 P2RX1P51575 399 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CCR4P51679 360 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 UGT2B15P54855 530 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 P2RX3P56373 397 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CTBP2P56545 445 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ESRRGP62508 458 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 RPP38P78345 283 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 HOXA4Q00056 320 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PRKCDQ05655 676 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 TSPAN31Q12999 210 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 SRSF6Q13247 344 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PDK3Q15120 406 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 TOMM34Q15785 309 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 Q5PR19 223 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ABHD17BQ5VST6 288 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 AADACL4Q5VUY2 407 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 UGT2A3Q6UWM9 527 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 RTL4Q6ZR62 310 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ERASQ7Z444 233 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CHERPQ8IWX8 916 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 NRMQ8IXM6 262 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 GPALPP1Q8IXQ4 340 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 BEST3Q8N1M1 668 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 WDSUB1Q8N9V3 476 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZNF555Q8NEP9 628 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZNF563Q8TA94 476 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 GNPDA2Q8TDQ7 276 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PAQR8Q8TEZ7 354 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 TMEM239Q8WW34 195 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 HAS2Q92819 552 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZNF503Q96F45 646 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CNBD2Q96M20 576 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 CCNL2Q96S94 520 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 TMEM43Q9BTV4 400 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ALG12Q9BV10 488 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 GABARAPL3Q9BY60 117 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ANGPTL4Q9BY76 406 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 ANKRD60Q9BZ19 345 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 DSN1Q9H410 356 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 METTL7AQ9H8H3 244 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 C12orf10Q9HB07 376 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 MOV10Q9HCE1 1003 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 PNRC2Q9NPJ4 139 aaKnown RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 MEPEQ9NQ76 525 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 KLRF1Q9NZS2 232 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 MED11Q9P086 117 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 TEKT2Q9UIF3 430 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 MED31Q9Y3C7 131 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 WIF1Q9Y5W5 379 aa4.57□□□□□ -1.68
HMGB1P4-201ENST00000455362 IGKV1D-42A0A075B6H8 117 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 A0A075B6Q4 140 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TMED7-TICAM2A0A0A6YYA0 188 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TRAV24A0A0B4J272 114 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 A0A0U1RQV5 110 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 SERTM2A0A1B0GWG4 89 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 ARGFXA6NJG6 315 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 G3V3Y1 287 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 H7C1Q1 480 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 CDC42EP2O14613 210 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 BCKDKO14874 412 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 ZZEF1O43149 2961 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TLX3O43711 291 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 CDC40O60508 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TRIM3O75382 744 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 WBP4O75554 376 aaKnown RBP4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 CLIC3O95833 236 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 NUDT14O95848 222 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 TSPAN15O95858 294 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 WDPCPO95876 746 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 PAHP00439 452 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 IGF2P01344 180 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 SFTPBP07988 381 aa4.56□□□□□ -1.68
HMGB1P4-201ENST00000455362 RPSAP08865 295 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms