RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MKRN2OSH3BPM6 223 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 SLC17A2O00624 439 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 CTDSP2O14595 271 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 TFECO14948 347 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 GSTZ1O43708 216 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 GFRA3O60609 400 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 RPP14O95059 124 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 UBL3O95164 117 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 SERPINA5P05154 406 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 GABRA1P14867 456 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 RAB6AP20340 208 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 TGFBR1P36897 503 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 PSMB10P40306 273 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 TPTEP56180 551 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 ASAH1Q13510 395 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 OXA1LQ15070 435 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 SLC36A2Q495M3 483 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 C1orf100Q5SVJ3 147 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 LYPD4Q6UWN0 246 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 UTS2BQ765I0 119 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 LRRTM1Q86UE6 522 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 VASH2Q86V25 355 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 ZNF100Q8IYN0 542 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 GHDCQ8N2G8 530 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 C1orf162Q8NEQ5 155 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 ASB5Q8WWX0 329 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 NANOS1Q8WY41 292 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 PP6455Q8WZ26 134 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 RGP1Q92546 391 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 TMEM106AQ96A25 262 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 APH1AQ96BI3 265 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 KCNS3Q9BQ31 491 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 USB1Q9BQ65 265 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 MIXL1Q9H2W2 232 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 PPP1R3EQ9H7J1 279 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 STEAP1Q9UHE8 339 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 ING1Q9UK53 422 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 MUC6Q6W4X9 2439 aa6.03□□□□□ -1.44
ECHDC1-210ENST00000454859 USP34Q70CQ2 3546 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 IGKV1D-43A0A0B4J1Z2 117 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ANXA2P2A6NMY6 339 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 PIN1P1O15428 100 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 RRP8O43159 456 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 RAMP1O60894 148 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ANXA2P07355 339 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 UBBP0CG47 229 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 DDOSTP39656 456 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 PITPNBP48739 271 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 MXD1Q05195 221 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 RSPO4Q2I0M5 234 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TRIM16LQ309B1 348 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 DEFB109BQ30KR1 87 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 IDNKQ5T6J7 187 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR7E24Q6IFN5 339 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 MZT2BQ6NZ67 158 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM131AQ6UXB0 335 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 LYSMD2Q8IV50 215 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR6M1Q8NGM8 313 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TSEN15Q8WW01 171 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ZC3HAV1LQ96H79 300 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 AMELYQ99218 206 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 FOXB1Q99853 325 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF416Q9BWM5 594 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 PBOV1Q9GZY1 135 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR10A2Q9H208 303 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OBP2BQ9NPH6 170 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ASH2LQ9UBL3 628 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 MALT1Q9UDY8 824 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF107Q9UII5 783 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 WASF3Q9UPY6 502 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 EMC9Q9Y3B6 208 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 NCOA6Q14686 2063 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM186AA6NE01 2351 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SLC22A20A6NK97 555 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SGCEO43556 437 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 KRT33AO76009 404 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 BPNT1O95861 308 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 CLEC2LP0C7M8 214 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 PRKAR1AP10644 381 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 CRYGSP22914 178 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 THBS4P35443 961 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR3A2P47893 321 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SELENOPP49908 381 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 MMP15P51511 669 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TGFBR3Q03167 851 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SGCAQ16586 387 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 RAB12Q6IQ22 244 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM166AQ6J272 317 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TMEM53Q6P2H8 277 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 DCDC5Q6ZRR9 648 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SIAH3Q8IW03 269 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 LAX1Q8IWV1 398 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SLC22A24Q8N4F4 322 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR10S1Q8NGN2 331 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR13C3Q8NGS6 347 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 OR1F12Q8NHA8 337 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TRMT10AQ8TBZ6 339 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 S100A16Q96FQ6 103 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 SORCS2Q96PQ0 1159 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 RBM24Q9BX46 236 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms