RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ABHD6Q9BV23 337 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ZNF223Q9UK11 482 aaPredicted RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 RBM7Q9Y580 266 aaKnown RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 HS3ST3A1Q9Y663 406 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 FAM230AA0A1W2PPH8 454 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 F5H5P2 479 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 MBTPS2O43462 519 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 LMX1BO60663 402 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ABCD3P28288 659 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 SLC6A1P30531 599 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 IL13RA1P78552 427 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 VASH2Q86V25 355 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 AKR7LQ8NHP1 331 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 NPAS1Q99742 590 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 GABRG3Q99928 467 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 DIDO1Q9BTC0 2240 aaKnown RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 C2orf16Q68DN1 1984 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 D6RAR5 112 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 AIPO00170 330 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PIN1P1O15428 100 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 OR2J2O76002 312 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PRH1P02810 166 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TMEM225BP0DP42 221 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 ABOP16442 354 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 POU3F2P20265 443 aaPredicted RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 ACHEP22303 614 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 KCNJ3P48549 501 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 NPY4RP50391 375 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 MFSD13AQ14CX5 517 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TMEM255AQ5JRV8 349 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TRILQ7L0X0 811 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 GPBAR1Q8TDU6 330 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 SGK3Q96BR1 496 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 SLC46A1Q96NT5 459 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PHF7Q9BWX1 381 aaPredicted RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 TRANK1O15050 2925 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 ACACAQ13085 2346 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 MED13LQ71F56 2210 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 FANCMQ8IYD8 2048 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 LOC107986453A0A1B0GWG9 222 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 GPRIN2O60269 458 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 KLK3P07288 261 aaPredicted RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 SNRNP70P08621 437 aaKnown RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 GNB3P16520 340 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 BCKDHBP21953 392 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 AVPR2P30518 371 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 S100A11P31949 105 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 RAB13P51153 203 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 BATFQ16520 125 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 MESTQ5EB52 335 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 NAA40Q86UY6 237 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 ZNF440Q8IYI8 595 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 POTEKPQ9BYX7 375 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 RTN4RQ9BZR6 473 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 VN1R1Q9GZP7 353 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 CHRDQ9H2X0 955 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PTP4A3O75365 173 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 CFDP00746 253 aaPredicted RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 NR2C1P13056 603 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 RGS19P49795 217 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 CLDN17P56750 224 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 DNM1P34Q6PK57 102 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TRAPPC6BQ86SZ2 158 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 ANGPTL5Q86XS5 388 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 PXT1Q8NFP0 134 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 STEAP2Q8NFT2 490 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 OR14A16Q8NHC5 309 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 KIAA1143Q96AT1 154 aaPredicted RBP10.06□□□□□ -0.8
DDR1-240ENST00000454612 TMEM231Q9H6L2 316 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 APMAPQ9HDC9 416 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 SLC5A6Q9Y289 635 aa10.06□□□□□ -0.8
DDR1-240ENST00000454612 TRAV36DV7A0A075B6V5 113 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 LINC00587B1AMM8 73 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 ZNF217O75362 1048 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 CSTBP04080 98 aaKnown RBP10.05□□□□□ -0.8
DDR1-240ENST00000454612 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 PPICP45877 212 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 KISS1RQ969F8 398 aaPredicted RBP10.05□□□□□ -0.8
DDR1-240ENST00000454612 CCDC74AQ96AQ1 378 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 POFUT1Q9H488 388 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 FBRSQ9HAH7 460 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 CA10Q9NS85 328 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 GFOD1Q9NXC2 390 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 UPB1Q9UBR1 384 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 CHRNA9Q9UGM1 479 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 PRR32B1ATL7 298 aa10.05□□□□□ -0.8
DDR1-240ENST00000454612 SNAPINO95295 136 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms