RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NSUN5Q96P11 429 aaKnown RBP8.23□□□□□ -1.09
NIPBL-202ENST00000448238 CDCP1Q9H5V8 836 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 NAT8Q9UHE5 227 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 SNRPGP15A8MWD9 76 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 I6L893 689 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-202ENST00000448238 SOX15O60248 233 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 CA2P00918 260 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 TEX30Q5JUR7 227 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 ERGIC1Q969X5 290 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 DUSP23Q9BVJ7 150 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 RTL8AQ9BWD3 113 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 SLC35B3Q9H1N7 401 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 PIPOXQ9P0Z9 390 aa8.23□□□□□ -1.09
NIPBL-202ENST00000448238 OR2A25A4D2G3 310 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 OR2W5A6NFC9 320 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 MFSD2BA6NFX1 497 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 C17orf105B2RV13 164 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 EFSO43281 561 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SNNO75324 88 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CEBPBP17676 345 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SNRPGP62308 76 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 FKBP1BP68106 108 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ILKQ13418 452 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 EDDM3AQ14507 147 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SLC38A5Q8WUX1 472 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PSENENQ9NZ42 101 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 MYOCOSA0A1B0GUC4 107 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 MFNGO00587 321 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CRYABP02511 175 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 MRPS24Q96EL2 167 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 APOBEC3BQ9UH17 382 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 MMACHCQ9Y4U1 282 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CDK5RAP2Q96SN8 1893 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SERPINE3A8MV23 424 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 B4DEV8 164 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TCF21O43680 179 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 JAM2P57087 298 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM64Q6YI46 380 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 GAL3ST2Q9H3Q3 398 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 INSL6Q9Y581 213 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 YJEFN3A6XGL0 299 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CALCBP10092 127 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZP3P21754 424 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ITGB7P26010 798 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ARR3P36575 388 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 FKBP1AP62942 108 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CACNG7P62955 275 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SAMD13Q5VXD3 122 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 COMMD6Q7Z4G1 85 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 OR51H1Q8NH63 302 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 NDRG1Q92597 394 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 FAM210BQ96KR6 192 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 JKAMPQ9P055 326 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 NDRG4Q9ULP0 352 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 HS3ST4Q9Y661 456 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM94Q12767 1356 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 A0A1W2PN81 502 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 A0A1W2PRU2 124 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF487B1APH4 448 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 RAB27BO00194 218 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF593O00488 134 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CHRNA7P36544 502 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZXDAP98168 799 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZXDBP98169 803 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF383Q8NA42 475 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TMED6Q8WW62 240 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TXLNGYQ9BZA5 131 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 DCTP40126 519 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SH3BP2P78314 561 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 OR8G1Q15617 311 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 GABRA6Q16445 453 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 RNF2Q99496 336 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 A3GALT2U3KPV4 340 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 IQGAP3Q86VI3 1631 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 ACOD1A6NK06 481 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PDE6DO43924 150 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PAFAH1B3Q15102 231 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 TECRLQ5HYJ1 363 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PIWIL3Q7Z3Z3 882 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 UTP4Q969X6 686 aaKnown RBP8.22□□□□□ -1.09
NIPBL-202ENST00000448238 GPR78Q96P69 363 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 SLC30A3Q99726 388 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 INPP5KQ9BT40 448 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 PELI2Q9HAT8 420 aa8.22□□□□□ -1.09
NIPBL-202ENST00000448238 CYR61O00622 381 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 PCP4P48539 62 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 MFAP4P55083 255 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 ZDHHC16Q969W1 377 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 CDC42EP3Q9UKI2 254 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 ORM2P19652 201 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 RGNQ15493 299 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 MSS51Q4VC12 460 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 FAM74A3Q4VXF1 159 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 LAX1Q8IWV1 398 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms