RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RABL2BQ9UNT1 228 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ASPMQ8IZT6 3477 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 DNPH1O43598 174 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ITGA3P26006 1051 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 CLDN15P56746 228 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 RAB11BQ15907 218 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ATAD3CQ5T2N8 411 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 SLC25A28Q96A46 364 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 CREB3L1Q96BA8 519 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ZNF775Q96BV0 537 aaPredicted RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 ADGRG7Q96K78 797 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 NUFIP1Q9UHK0 495 aaKnown RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 RTTNQ86VV8 2226 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 GABARAPH6UMI1 98 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 NR2C1P13056 603 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 HSD11B1P28845 292 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 PRKXP51817 358 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 CARD18P57730 90 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 TAS2R20P59543 309 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 SGCAQ16586 387 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 TBRG1Q3YBR2 411 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 RHOUQ7L0Q8 258 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 SLC7A6Q92536 515 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 FAM3DQ96BQ1 224 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 PLEKHA1Q9HB21 404 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 CGGBP1Q9UFW8 167 aaPredicted RBP15.42■□□□□ 0.06
SMC6-206ENST00000446852 MRPS18CQ9Y3D5 142 aaKnown RBP15.42■□□□□ 0.06
SMC6-206ENST00000446852 CXCL13O43927 109 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 TRAPPC2P0DI81 140 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 TRAPPC2BP0DI82 140 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 CD37P11049 281 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 NTF4P34130 210 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 RFC3P40938 356 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 NKX2-5P52952 324 aaPredicted RBP15.42■□□□□ 0.06
SMC6-206ENST00000446852 GFRA1P56159 465 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 RAB25P57735 213 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 SPOCK1Q08629 439 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 C2orf76Q3KRA6 126 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 OR2M7Q8NG81 312 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 NKD1Q969G9 470 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 NABP1Q96AH0 204 aa15.42■□□□□ 0.06
SMC6-206ENST00000446852 ZNF275Q9NSD4 429 aaPredicted RBP15.42■□□□□ 0.06
SMC6-206ENST00000446852 INMT-MINDY4F8WBC2 141 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 SULT1B1O43704 296 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 MT-ND4P03905 459 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 SLC2A1P11166 492 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 MSR1P21757 451 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 MNDAP41218 407 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 CSRP2Q16527 193 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 FOXL2NBQ6ZUU3 175 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 GLRX5Q86SX6 157 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 OR10D3Q8NH80 312 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ZNF837Q96EG3 531 aaPredicted RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 SF3B5Q9BWJ5 86 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 NELFAQ9H3P2 528 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 KLK11Q9UBX7 282 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ZNF221Q9UK13 617 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 BOKQ9UMX3 212 aaPredicted RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 A0A1B0GTI1 187 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 DCDC2BA2VCK2 349 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ZNF716A6NP11 495 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 HLA-DMAP28067 261 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 LSM6P62312 80 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 ENDOGQ14249 297 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 TAF13Q15543 124 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 GLYATL3Q5SZD4 288 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 GLT8D1Q68CQ7 371 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 LINC00696Q6ZRV3 163 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ROBO4Q8WZ75 1007 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 FGGYQ96C11 551 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ADAT3Q96EY9 351 aaPredicted RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 UTP23Q9BRU9 249 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 PLA2G3Q9NZ20 509 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 MRPL15Q9P015 296 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 ZNF319Q9P2F9 582 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 POU2F3Q9UKI9 436 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 RBMX2Q9Y388 322 aaKnown RBP15.41■□□□□ 0.06
SMC6-206ENST00000446852 FLVCR1Q9Y5Y0 555 aa15.41■□□□□ 0.06
SMC6-206ENST00000446852 ZNF292O60281 2723 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 LOC100289279A0A1B0GTE1 492 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 CENPXA8MT69 81 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 DHHO43323 396 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 SYT7O43581 403 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 CTAG2O75638 210 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 GLSO94925 669 aaPredicted RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 POU3F2P20265 443 aaPredicted RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 ZNF121P58317 390 aaPredicted RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 ANKRD16Q6P6B7 361 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 LYPD6Q86Y78 171 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 IL22RA1Q8N6P7 574 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 ZBTB8BQ8NAP8 495 aaPredicted RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 DEFB124Q8NES8 71 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 OR1J2Q8NGS2 313 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 OR2V1Q8NHB1 315 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 OR51E1Q8TCB6 317 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 FAM173AQ9BQD7 235 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 RBM24Q9BX46 236 aaKnown RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 NIPAL2Q9H841 368 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 NUDT15Q9NV35 164 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms