RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 MFFQ9GZY8 342 aa11.24□□□□□ -0.61
TRO-215ENST00000445561 GDF2Q9UK05 429 aaPredicted RBP11.24□□□□□ -0.61
TRO-215ENST00000445561 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
TRO-215ENST00000445561 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 MFSD2BA6NFX1 497 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 H3BUI4 141 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 LGALS8O00214 317 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 SULT1C2O00338 296 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 CCSO14618 274 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 B3GALNT1O75752 331 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 PMS2P2O95744 297 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 GMFBP60983 142 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 C17orf67Q0P5P2 114 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 GK2Q14410 553 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 INPP5JQ15735 1006 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 OR52W1Q6IF63 320 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 PAPD4Q6PIY7 484 aaKnown RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 ANKRD37Q7Z713 158 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 STEAP2Q8NFT2 490 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 MFSD8Q8NHS3 518 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 CCDC107Q8WV48 283 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 C11orf40Q8WZ69 217 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 ADAT3Q96EY9 351 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 CHST11Q9NPF2 352 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 UPB1Q9UBR1 384 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 MEGF11A6BM72 1044 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 TUBAL3A6NHL2 446 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 EFNA2O43921 213 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 GIMD1P0DJR0 217 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 FOXK1P85037 733 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 DHRS2Q13268 280 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 PCK2Q16822 640 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 CDNFQ49AH0 187 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 TMEM244Q5VVB8 128 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 ZNF660Q6AZW8 331 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 RNF144BQ7Z419 303 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 FJX1Q86VR8 437 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 ZNF584Q8IVC4 421 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 CHST4Q8NCG5 386 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 NUDCD2Q8WVJ2 157 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 RNF133Q8WVZ7 376 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 ST8SIA1Q92185 356 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 SPACA5Q96QH8 159 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 SLC25A21Q9BQT8 299 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 ALX4Q9H161 411 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 TTYH1Q9H313 450 aaPredicted RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 FAM206AQ9NX38 181 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 KLRF1Q9NZS2 232 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 TMEM200CA6NKL6 621 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 AQP8O94778 261 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 TTRP02766 147 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 HEXBP07686 556 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 UBCP0CG48 685 aaKnown RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 CD37P11049 281 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
TRO-215ENST00000445561 ZP4Q12836 540 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 UNC119Q13432 240 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 MPPED2Q15777 294 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 C1orf100Q5SVJ3 147 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 ZNF813Q6ZN06 617 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 MISPQ8IVT2 679 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 OR10S1Q8NGN2 331 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 DDIT4LQ96D03 193 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 VSIG4Q9Y279 399 aa11.23□□□□□ -0.61
TRO-215ENST00000445561 LIPT2A6NK58 231 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 RAB27BO00194 218 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 MBTPS2O43462 519 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 HLA-AP01891 365 aaKnown RBP11.22□□□□□ -0.61
TRO-215ENST00000445561 RLN2P04090 185 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 BDKRB2P30411 391 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 CDAP32320 146 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 FAM69BQ5VUD6 431 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 C3orf33Q6P1S2 294 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 TRAPPC6BQ86SZ2 158 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 BEST3Q8N1M1 668 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
TRO-215ENST00000445561 NFAM1Q8NET5 270 aaPredicted RBP11.22□□□□□ -0.61
TRO-215ENST00000445561 OR10H5Q8NGA6 315 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 OR13C9Q8NGT0 318 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 SEC22AQ96IW7 307 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 PBOV1Q9GZY1 135 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 NOP16Q9Y3C1 178 aaKnown RBP11.22□□□□□ -0.61
TRO-215ENST00000445561 RFPL4AA6NLU0 287 aa11.22□□□□□ -0.61
TRO-215ENST00000445561 VSTM2BA6NLU5 285 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms