RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GRXCR1A8MXD5 290 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC17A2O00624 439 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 HMGA1P17096 107 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 SGCGQ13326 291 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ZSCAN4Q8NAM6 433 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 TMED7Q9Y3B3 224 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 COL14A1Q05707 1796 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 ARPC3O15145 178 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 PPM1DO15297 605 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 THY1P04216 161 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 GNB3P16520 340 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 LSM6P62312 80 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 MESTQ5EB52 335 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ADAD2Q8NCV1 583 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 CMBLQ96DG6 245 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 MALSU1Q96EH3 234 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 WDR76Q9H967 626 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TRBV6-7A0A0A0MS04 114 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 XKRY2A2RUG3 117 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 PCCBP05166 539 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CD1CP29017 333 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 FZD5Q13467 585 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SSC5DA1L4H1 1573 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DIDO1Q9BTC0 2240 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 FCGR3AP08637 254 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 GPR18Q14330 331 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TANGO2Q6ICL3 276 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ZNF705AQ6ZN79 300 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 ZNF429Q86V71 674 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TCTN2Q96GX1 697 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 PITPNC1Q9UKF7 332 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 B3GALT5Q9Y2C3 310 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 STARD10Q9Y365 291 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 A0A0B4J2E0 115 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 A0A1B0GX12 115 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RPL12P30050 165 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 TMEM33P57088 247 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC35A1P78382 337 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CCINQ13939 588 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 KCNAB1Q14722 419 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 C1orf87Q8N0U7 546 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NMNAT2Q9BZQ4 307 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SRMSQ9H3Y6 488 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 KCNK15Q9H427 330 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CHRNA9Q9UGM1 479 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 FBXO7Q9Y3I1 522 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DICER1Q9UPY3 1922 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 MYO7BQ6PIF6 2116 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 EPPINO95925 133 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CD200P41217 278 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CSNK1G2P78368 415 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DCST2Q5T1A1 773 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 LRRC69Q6ZNQ3 347 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 AMER3Q8N944 861 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ATG101Q9BSB4 218 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 HDGFL3Q9Y3E1 203 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TIMM10BQ9Y5J6 103 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 KAT7O95251 611 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 MELTFP08582 738 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RPS2P15880 293 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 GABRR1P24046 479 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SULT1A2P50226 295 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TMEM225Q6GV28 225 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CACUL1Q86Y37 369 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ARRDC1Q8N5I2 433 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CNRIP1Q96F85 164 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 FRRS1LQ9P0K9 344 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DOK5Q9P104 306 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ARFGEF3Q5TH69 2177 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 LTBP3Q9NS15 1303 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 A0A1W2PPE3 182 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 IGHV2-5P01817 119 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 PMELP40967 661 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NR0B2Q15466 257 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 MST1LQ2TV78 715 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ADAMTS17Q8TE56 1095 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 AQP3Q92482 292 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RAB24Q969Q5 203 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RELTQ969Z4 430 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NTNG2Q96CW9 530 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 YIPF1Q9Y548 306 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ZDBF2Q9HCK1 2354 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 C9JQL5 133 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 TGOLN2O43493 480 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 CSNK2A1P68400 391 aaPredicted RBP4.53□□□□□ -1.68
HERC1-201ENST00000443617 DHCR24Q15392 516 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 BATFQ16520 125 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 FAM180AQ6UWF9 173 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 SLC35D2Q76EJ3 337 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 ZNF440Q8IYI8 595 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 CSNK2A3Q8NEV1 391 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 OR5K2Q8NHB8 316 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 TOX2Q96NM4 488 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 PDE7BQ9NP56 450 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 SLC22A13Q9Y226 551 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 CCDC187A0A096LP49 1063 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 MYADML2A6NDP7 307 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 NFKBIEO00221 500 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 CMPK1P30085 196 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms