RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 EFNA4P52798 201 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 SNAPC1Q16533 368 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 SLX4IPQ5VYV7 408 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 ARL9Q6T311 187 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 CXXC5Q7LFL8 322 aaKnown RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 ERI1Q8IV48 349 aaKnown RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 CIARTQ8N365 385 aaPredicted RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 GTF3AQ92664 365 aaKnown RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 ZMYND19Q96E35 227 aaPredicted RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 MARS2Q96GW9 593 aaKnown RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 ATF6BQ99941 703 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 RBM4BQ9BQ04 359 aaKnown RBP15.46■□□□□ 0.07
CPSF4-205ENST00000440514 RIBC2Q9H4K1 309 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 ELOVL3Q9HB03 270 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 DLL4Q9NR61 685 aa15.46■□□□□ 0.07
CPSF4-205ENST00000440514 VPS13CQ709C8 3753 aa15.46■□□□□ 0.06
CPSF4-205ENST00000440514 ZNF469Q96JG9 3925 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-205ENST00000440514 ZAR1LA6NP61 321 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 EI24O14681 340 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 PRKYO43930 277 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 GSTT1P30711 240 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 TNK1Q13470 666 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 NKPD1Q17RQ9 610 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 KLHL12Q53G59 568 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 DNM1P46Q6ZS02 220 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 DCXRQ7Z4W1 244 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 OR6N2Q8NGY6 317 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 INTS14Q96SY0 518 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 TAAR3PQ9P1P4 343 aa15.45■□□□□ 0.06
CPSF4-205ENST00000440514 ZNF593O00488 134 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 PRODHO43272 600 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 F12P00748 615 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 NAT2P11245 290 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 SLC2A5P22732 501 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 GCH1P30793 250 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 POLR2IP36954 125 aaKnown RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 RPS7P62081 194 aaKnown RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 PCK2Q16822 640 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 RSPO1Q2MKA7 263 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 KRTAP27-1Q3LI81 207 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 ZNF718Q3SXZ3 478 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 C12orf73Q69YU5 71 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 KLF14Q8TD94 323 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-205ENST00000440514 GABARAPL3Q9BY60 117 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 RAB1BQ9H0U4 201 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 MARCH7Q9H992 704 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 TBCCD1Q9NVR7 557 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 STARD10Q9Y365 291 aa15.44■□□□□ 0.06
CPSF4-205ENST00000440514 MED13LQ71F56 2210 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 IGHV4-30-2A0A087WSY4 118 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 F5H5K5 113 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 SMAD7O15105 426 aaKnown RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 SELENOFO60613 162 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 ALPLP05186 524 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 NAA10P41227 235 aaPredicted RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 SELENOVP59797 346 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 APOFQ13790 326 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 EIF2B1Q14232 305 aaKnown RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 MBNL2Q5VZF2 373 aaKnown RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 CLEC2AQ6UVW9 174 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 SPATC1Q76KD6 591 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 BCDIN3DQ7Z5W3 292 aaKnown RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 TIGD4Q8IY51 512 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 PQLC1Q8N2U9 271 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 CBR4Q8N4T8 237 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 ST7LQ8TDW4 575 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 SLAMF6Q96DU3 332 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 COX4I2Q96KJ9 171 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 DCLRE1CQ96SD1 692 aaKnown RBP15.43■□□□□ 0.06
CPSF4-205ENST00000440514 C9orf16Q9BUW7 83 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 C8orf4Q9NR00 106 aa15.43■□□□□ 0.06
CPSF4-205ENST00000440514 CCDC182A6NF36 153 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 IGHV3-13P01766 116 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 ERCC1P07992 297 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-205ENST00000440514 ACSM4P0C7M7 580 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 TUBG1P23258 451 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 RGS6P49758 472 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 RAD23AP54725 363 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 ECH1Q13011 328 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 CARTPTQ16568 116 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 TEX30Q5JUR7 227 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 DPY19L4Q7Z388 723 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 TCEANCQ8N8B7 351 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 SNX33Q8WV41 574 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 AMELYQ99218 206 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 COPS4Q9BT78 406 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 TUBG2Q9NRH3 451 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 DDX28Q9NUL7 540 aaKnown RBP15.42■□□□□ 0.06
CPSF4-205ENST00000440514 SLCO1C1Q9NYB5 712 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 USE1Q9NZ43 259 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 PTTG3PQ9NZH4 202 aa15.42■□□□□ 0.06
CPSF4-205ENST00000440514 ACANP16112 2415 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 RNF223E7ERA6 249 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 H3BSA7 217 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 NCR1O76036 304 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 BAG2O95816 211 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 ANOS1P23352 680 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 ALDH3A2P51648 485 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 SLC35D3Q5M8T2 416 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 NAA40Q86UY6 237 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms