RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CYSLTR2Q9NS75 346 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 DECR2Q9NUI1 292 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 MRPL22Q9NWU5 206 aaKnown RBP20.49■□□□□ 0.87
CPNE1-217ENST00000439669 NKIRAS2Q9NYR9 191 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 TVP23AA6NH52 213 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 RIIAD1A6NNX1 92 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 CDC14BO60729 498 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 GPR6P46095 362 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-217ENST00000439669 MMP15P51511 669 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 MRPS11P82912 194 aaKnown RBP20.48■□□□□ 0.87
CPNE1-217ENST00000439669 TRIP10Q15642 601 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF362Q5T0B9 420 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-217ENST00000439669 IQCF1Q8N6M8 205 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF556Q9HAH1 456 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF275Q9NSD4 429 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-217ENST00000439669 DNAJB9Q9UBS3 223 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 CGGBP1Q9UFW8 167 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-217ENST00000439669 KCNG2Q9UJ96 466 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 STARD10Q9Y365 291 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 NAV3Q8IVL0 2385 aa20.48■□□□□ 0.87
CPNE1-217ENST00000439669 ZSCAN5BA6NJL1 495 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 TACSTD2P09758 323 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF3P17036 446 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 TUBG1P23258 451 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 GGT2P36268 569 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 LIPAP38571 399 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 RGS6P49758 472 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 PSG7Q13046 419 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 ZMAT1Q5H9K5 638 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 HS3ST5Q8IZT8 346 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 PAPD5Q8NDF8 572 aaKnown RBP20.47■□□□□ 0.87
CPNE1-217ENST00000439669 SLCO4A1Q96BD0 722 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 RBM4Q9BWF3 364 aaKnown RBP20.47■□□□□ 0.87
CPNE1-217ENST00000439669 SAP30LQ9HAJ7 183 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 TUBG2Q9NRH3 451 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 CYB5R1Q9UHQ9 305 aa20.47■□□□□ 0.87
CPNE1-217ENST00000439669 YLPM1P49750 1951 aaKnown RBP20.46■□□□□ 0.87
CPNE1-217ENST00000439669 PPIHO43447 177 aaKnown RBP20.46■□□□□ 0.87
CPNE1-217ENST00000439669 LILRA1O75019 489 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 CRLF1O75462 422 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 IGHV1-46P01743 117 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 GYPBP06028 91 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 POU1F1P28069 291 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 LYPD4Q6UWN0 246 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 USP51Q70EK9 711 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 ZNRF4Q8WWF5 429 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 CMBLQ96DG6 245 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 ATF6BQ99941 703 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 MSL2Q9HCI7 577 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 PTTG3PQ9NZH4 202 aa20.46■□□□□ 0.87
CPNE1-217ENST00000439669 PURGQ9UJV8 347 aaKnown RBP20.46■□□□□ 0.87
CPNE1-217ENST00000439669 IGHV1-69-2A0A0G2JMI3 117 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 J3QW42 95 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 TIPRLO75663 272 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 RP2O75695 350 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 SPI1P17947 270 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 PRKACGP22612 351 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 GRK5P34947 590 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 RPS27P42677 84 aaKnown RBP20.45■□□□□ 0.86
CPNE1-217ENST00000439669 SLC25A1P53007 311 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 KRTAP21-3Q3LHN1 58 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 FAM209AQ5JX71 171 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 OR5L1Q8NGL2 311 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 OR6K6Q8NGW6 343 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 APOBEC3DQ96AK3 386 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-217ENST00000439669 OTULINQ96BN8 352 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 MSI2Q96DH6 328 aaKnown RBP20.45■□□□□ 0.86
CPNE1-217ENST00000439669 NARFLQ9H6Q4 476 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 CMC2Q9NRP2 79 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 COMMD3-BMI1R4GMX3 469 aa20.45■□□□□ 0.86
CPNE1-217ENST00000439669 SONP18583 2426 aaKnown RBP20.45■□□□□ 0.86
CPNE1-217ENST00000439669 LOC100289279A0A1B0GTE1 492 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 F5H5K5 113 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 DEAF1O75398 565 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-217ENST00000439669 CLUP10909 449 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 FMO3P31513 532 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 TMEM33P57088 247 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 ECH1Q13011 328 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 CCNIQ14094 377 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 C1orf146Q5VVC0 180 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 SLC27A4Q6P1M0 643 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 ATG16L2Q8NAA4 619 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 MAP6Q96JE9 813 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 NMNAT2Q9BZQ4 307 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 EGLN1Q9GZT9 426 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 ZDHHC8Q9ULC8 765 aa20.44■□□□□ 0.86
CPNE1-217ENST00000439669 SPARCP09486 303 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 ANXA8P13928 327 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 KITLGP21583 273 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 IL2RGP31785 369 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 CRYBB2P43320 205 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 FAM166AQ6J272 317 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 ZNF511Q8NB15 262 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 HPS1Q92902 700 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 PTP4A1Q93096 173 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 HAVCR1Q96D42 359 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 ELMOD3Q96FG2 381 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 DIRC2Q96SL1 478 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 MMADHCQ9H3L0 296 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-217ENST00000439669 WDR76Q9H967 626 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms