RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SH2D6Q7Z4S9 175 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 PQLC3Q8N755 202 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 OR5K2Q8NHB8 316 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 MARCH1Q8TCQ1 289 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 CREB3L1Q96BA8 519 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 LZTS2Q9BRK4 669 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 IFI27L2Q9H2X8 130 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 NTN4Q9HB63 628 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 PXMP2Q9NR77 195 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 KCNE3Q9Y6H6 103 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 ZNF646O15015 1829 aaPredicted RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 ITSN1Q15811 1721 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 ASXL1Q8IXJ9 1541 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 ATP7BP35670 1465 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 NPHP4O75161 1426 aaPredicted RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 ANKARQ7Z5J8 1434 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 INSRP06213 1382 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 A0A1B0GTQ1 180 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 FAM166BA8MTA8 275 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 NUPL2O15504 423 aaKnown RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 CLDN11O75508 207 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 LSM8O95777 96 aaKnown RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 ARG1P05089 322 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CT45A6P0DMU7 189 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CT45A5P0DMU8 189 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CT45A7P0DMV0 189 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 FOLR1P15328 257 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 ZNF133P52736 654 aaPredicted RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 NCF4Q15080 339 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 PTPN20Q4JDL3 420 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CT45A1Q5HYN5 189 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 TMEM255AQ5JRV8 349 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 PIP5KL1Q5T9C9 394 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 IQCF2Q8IXL9 164 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 MDS2Q8NDY4 140 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CT45A3Q8NHU0 189 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 GPX8Q8TED1 209 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 GLYATL2Q8WU03 294 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 RNF138Q8WVD3 245 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 TMEM230Q96A57 120 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 ISG20Q96AZ6 181 aaKnown RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 TAAR1Q96RJ0 339 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 SLC25A2Q9BXI2 301 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 BLZF1Q9H2G9 400 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 CDC42EP4Q9H3Q1 356 aaKnown RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 PIGUQ9H490 435 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 DMAP1Q9NPF5 467 aaPredicted RBP4.06□□□□□ -1.76
USP54-206ENST00000433394 ANAPC11Q9NYG5 84 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 UVRAGQ9P2Y5 699 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 NWD1Q149M9 1564 aa4.06□□□□□ -1.76
USP54-206ENST00000433394 DCCP43146 1447 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 ANKRD36BQ8N2N9 1353 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 A0A1W2PRD5 423 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 SCAMP2O15127 329 aaKnown RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 CHMP2AO43633 222 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 ZNF861PO60384 105 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 SLC25A14O95258 325 aaPredicted RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 HLA-HP01893 362 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 SERPINE2P07093 398 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 UBCP0CG48 685 aaKnown RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 OMGP23515 440 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 CEACAM6P40199 344 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 CXCL5P42830 114 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 NCBP2P52298 156 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP54-206ENST00000433394 MXD1Q05195 221 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 RAD51Q06609 339 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 DOC2AQ14183 400 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 PON3Q15166 354 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 HADHQ16836 314 aaKnown RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 ZNF658BQ4V348 819 aaPredicted RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 HSP90AA4PQ58FG1 418 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 HES5Q5TA89 166 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 UBE2UQ5VVX9 321 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 Q8N7P7 452 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 ARIH2OSQ8N7S6 290 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 DUSP18Q8NEJ0 188 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 NTAN1Q96AB6 310 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 UCK2Q9BZX2 261 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 MRM3Q9HC36 420 aaKnown RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 ISYNA1Q9NPH2 558 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 NYAP2Q9P242 653 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 MYEF2Q9P2K5 600 aaKnown RBP4.05□□□□□ -1.76
USP54-206ENST00000433394 CDC42BPGQ6DT37 1551 aa4.05□□□□□ -1.76
USP54-206ENST00000433394 GTF3C1Q12789 2109 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MYOM1P52179 1685 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 GOLGA6L7A0A1B0GV03 622 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 WI2-2373I1.2A0A1W2PRP0 233 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 TMEM120BA0PK00 339 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 TEX46H3BTG2 121 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 AIREO43918 545 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 HSBP1O75506 76 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 PCCAP05165 728 aaPredicted RBP4.04□□□□□ -1.76
USP54-206ENST00000433394 HOXA9P31269 272 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MAS1LP35410 378 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 RPS5P46782 204 aaKnown RBP4.04□□□□□ -1.76
USP54-206ENST00000433394 DNAJC3Q13217 504 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 MAB21L1Q13394 359 aa4.04□□□□□ -1.76
USP54-206ENST00000433394 GGTLC2Q14390 218 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms