RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ISOC1Q96CN7 298 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 OR2H1Q9GZK4 316 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 SLC25A19Q9HC21 320 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 TVP23AA6NH52 213 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 TRIM64BA6NI03 449 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 RIIAD1A6NNX1 92 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 RGS10O43665 173 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 ZNF35P13682 527 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 PAX1P15863 534 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 ZNF3P17036 446 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 SPI1P17947 270 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 GABRB1P18505 474 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 PCMT1P22061 227 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 HSF2Q03933 536 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 KCNMB1Q16558 191 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 ZNF774Q6NX45 483 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 CORO6Q6QEF8 472 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 PRSS48Q7RTY5 328 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 ERI1Q8IV48 349 aaKnown RBP13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 PROKR2Q8NFJ6 384 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 SGCDQ92629 289 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 OTULINQ96BN8 352 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 CA10Q9NS85 328 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 TVP23BQ9NYZ1 205 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 ASH2LQ9UBL3 628 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 LHFPL6Q9Y693 200 aa13.55□□□□□ -0.24
CLK3P2-201ENST00000427566 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 H7C1Q1 480 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 RER1O15258 196 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 SSX4O60224 188 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 NOL3O60936 208 aaKnown RBP13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 IFNGP01579 166 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 BMP4P12644 408 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 TMBIM6P55061 237 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 GLO1Q04760 184 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 CLEC12BQ2HXU8 276 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 SLX4IPQ5VYV7 408 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 PLBD1Q6P4A8 553 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 DPPA2Q7Z7J5 298 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 LINC00346Q8IVM7 164 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 OR4F15Q8NGB8 312 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 TRUB1Q8WWH5 349 aaKnown RBP13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 UBE2FQ969M7 185 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 C18orf12Q96KH6 178 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 SIGLEC11Q96RL6 698 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 CCDC90BQ9GZT6 254 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 WDR76Q9H967 626 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 PMF1-BGLAPU3KQ54 211 aa13.54□□□□□ -0.24
CLK3P2-201ENST00000427566 ARFGEF3Q5TH69 2177 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 MAP1AP78559 2803 aaPredicted RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 IGHV4-39P01824 125 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 HMGN1P05114 100 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 SLC25A1P53007 311 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 NUDT6P53370 316 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 LSM6P62312 80 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 EMX1Q04741 257 aaPredicted RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 SNTB2Q13425 540 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 RAB35Q15286 201 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 SNAPC1Q16533 368 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 SMN1Q16637 294 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 MSMPQ1L6U9 139 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 LINC01590Q5TEZ4 76 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 BCDIN3DQ7Z5W3 292 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 CPOQ8IVL8 374 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 OR2T4Q8NH00 348 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 MYDGFQ969H8 173 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 C12orf43Q96C57 262 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 OR51V1Q9H2C8 321 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 FKBP14Q9NWM8 211 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 PSORS1C1Q9UIG5 152 aa13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 TEP1Q99973 2627 aaKnown RBP13.53□□□□□ -0.24
CLK3P2-201ENST00000427566 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 VSTM5A8MXK1 200 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 PRKYO43930 277 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 GPRIN2O60269 458 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 INHBBP09529 407 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 OR4A8P0C604 315 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 CCNOP22674 350 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 STOMP27105 288 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 THBS4P35443 961 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 SERPINF1P36955 418 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 PCBD1P61457 104 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 SNRPD2P62316 118 aaKnown RBP13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 GALK2Q01415 458 aa13.52□□□□□ -0.25
CLK3P2-201ENST00000427566 PLP2Q04941 152 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms