RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SNAI2O43623 268 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ANGPTL7O43827 346 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 OR2J3O76001 311 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CTDNEP1O95476 244 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 YEATS4O95619 227 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 IGLV2-23P01705 113 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CT62P0C5K7 136 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 HSPD1P10809 573 aaKnown RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 PRPS2P11908 318 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MAGP20916 626 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MSNP26038 577 aaKnown RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 GDI1P31150 447 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 HRH1P35367 487 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MAS1LP35410 378 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 RFX3P48380 749 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 TMED10P49755 219 aaKnown RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CCNHP51946 323 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF136P52737 540 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CDH6P55285 790 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 GPX6P59796 221 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 RAP1AP62834 184 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 IRX3P78415 501 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 EBI3Q14213 229 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CLINT1Q14677 625 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 PON3Q15166 354 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ALX1Q15699 326 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 KCTD19Q17RG1 926 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 RSPO1Q2MKA7 263 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 DEFB116Q30KQ4 102 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM255AQ5JRV8 349 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CCNJQ5T5M9 372 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 SLC8B1Q6J4K2 584 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 LYPD2Q6UXB3 125 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ABHD13Q7L211 337 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CYB561D1Q8N8Q1 229 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 OR1S2Q8NGQ3 325 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 OR10R2Q8NGX6 335 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 OR2L8Q8NGY9 312 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF502Q8TBZ5 544 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 GPR151Q8TDV0 419 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ZFP90Q8TF47 636 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 KIFAP3Q92845 792 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CNDP1Q96KN2 507 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 PKNOX2Q96KN3 472 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 SLC29A1Q99808 456 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC77Q9BR77 488 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 NUP58Q9BVL2 599 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 FAM192AQ9GZU8 254 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CLSTN2Q9H4D0 955 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 PITPNC1Q9UKF7 332 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CFAP45Q9UL16 551 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 TBX21Q9UL17 535 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ING4Q9UNL4 249 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 GOLT1BQ9Y3E0 138 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 CSDC2Q9Y534 153 aaKnown RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MRPS18BQ9Y676 258 aaKnown RBP1.54□□□□□ -2.16
PTPRC-208ENST00000427110 ASTN1O14525 1302 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 RIC1Q4ADV7 1423 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 SLIT2O94813 1529 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 LTBP4Q8N2S1 1624 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 NHSQ6T4R5 1651 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 LTBP1Q14766 1721 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 BTAF1O14981 1849 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 UBR3Q6ZT12 1888 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 NAV1Q8NEY1 1877 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MYH4Q9Y623 1939 aa1.54□□□□□ -2.16
PTPRC-208ENST00000427110 MROH7-TTC4A0A0A0MT08 1334 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 TRAV39A0A0B4J263 110 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 VPS37CA5D8V6 355 aaPredicted RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 TRIM64CA6NLI5 447 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 LRRC37AA6NMS7 1700 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF716A6NP11 495 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 AP3B1O00203 1094 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 NEMFO60524 1076 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 DPM1O60762 260 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SLC25A14O95258 325 aaPredicted RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 UTS2O95399 124 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 RAB3DO95716 219 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 AIFM1O95831 613 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 C6orf47O95873 294 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF735P0CB33 412 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 OMGP23515 440 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 MYH10P35580 1976 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 NSG1P42857 185 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SSR4P51571 173 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 COL4A4P53420 1690 aaPredicted RBP1.53□□□□□ -2.16
PTPRC-208ENST00000427110 KRTAP10-1P60331 282 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 PFN3P60673 137 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 LRRC74AQ0VAA2 488 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 ERCC8Q13216 396 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SLAQ13239 276 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 GINS1Q14691 196 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 PSME4Q14997 1843 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 SYCP1Q15431 976 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 QSER1Q2KHR3 1735 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 PTPN20Q4JDL3 420 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 XKR7Q5GH72 579 aa1.53□□□□□ -2.16
PTPRC-208ENST00000427110 DDX60LQ5H9U9 1706 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms