RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RP1L1Q8IWN7 2480 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 A0A1B0GVI7 797 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM269A0A1B0GVZ9 245 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MBD3L4A6NDZ8 208 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MBD3L3A6NE82 208 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MBD3L5A6NJ08 208 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OR4C45A6NMZ5 311 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 AHRRA9YTQ3 701 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 E9PI62 339 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 RPL36A-HNRNPH2H7BZ11 118 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 K7EM74 188 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 M0R135 149 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TAF4O00268 1085 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 PRRG2O14669 202 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 PDCD5O14737 125 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MAGEB4O15481 346 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SGCEO43556 437 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 UBL3O95164 117 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CDRT1O95170 752 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CNOT4O95628 575 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TGM6O95932 706 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 IGHV3-9P01782 118 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CRHP06850 196 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ANXA2P07355 339 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HOXD4P09016 255 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OCM2P0CE71 109 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TMIGD3P0DMS9 266 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SFTPCP11686 197 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MPGP29372 298 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 S100A5P33763 92 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 KIR3DL2P43630 455 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TDGF1P3P51864 188 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TGFBR3Q03167 851 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MXD1Q05195 221 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 KLRB1Q12918 225 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 PLEKHN1Q494U1 663 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF404Q494X3 552 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 Q499Y3 187 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SOWAHCQ53LP3 525 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ZMAT1Q5H9K5 638 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ELFN2Q5R3F8 820 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FAM27BQ5VT28 67 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM244Q5VVB8 128 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FBXW9Q5XUX1 488 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 GFRALQ6UXV0 394 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TFAP2EQ6VUC0 442 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 LINC00299Q6ZSB3 139 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FAM214BQ7L5A3 538 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CEACAM19Q7Z692 300 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SYT9Q86SS6 491 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CATSPERDQ86XM0 798 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CROCCP3Q8IVE0 287 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 LRRC18Q8N456 261 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SLC22A24Q8N4F4 322 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TEX19Q8NA77 164 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 C9orf106Q8NAJ2 232 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 C1orf162Q8NEQ5 155 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OR13C3Q8NGS6 347 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OR13C5Q8NGS8 318 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MBD3L2Q8NHZ7 208 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FAM57AQ8TBR7 257 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 S100ZQ8WXG8 99 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HSD17B8Q92506 261 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HTRA1Q92743 480 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TRMT61AQ96FX7 289 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF799Q96GE5 643 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MAP6Q96JE9 813 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OR14A2Q96R54 314 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 PDCD1LG2Q9BQ51 273 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SLX1AQ9BQ83 275 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 MED18Q9BUE0 208 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 WDR12Q9GZL7 423 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 C6orf62Q9GZU0 229 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CXorf56Q9H5V9 222 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SP140LQ9H930 580 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HMG20AQ9NP66 347 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SLC7A10Q9NS82 523 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SNTG1Q9NSN8 517 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 CRNNQ9UBG3 495 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 NUFIP1Q9UHK0 495 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 ADAM30Q9UKF2 790 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 OR52A1Q9UKL2 312 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FBXL3Q9UKT7 428 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 HHLA2Q9UM44 414 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 PROCRQ9UNN8 238 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 DHDHQ9UQ10 334 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 SF3B6Q9Y3B4 125 aaKnown RBP5.24□□□□□ -1.57
HMGB3-202ENST00000419110 A3GALT2U3KPV4 340 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 FRYQ5TBA9 3013 aa5.24□□□□□ -1.57
HMGB3-202ENST00000419110 TRBV5-5A0A0J9YX44 114 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 IQCMA0A1B0GVH7 501 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 MED19A0JLT2 244 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 OR6C6A6NF89 314 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ACOD1A6NK06 481 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ANXA2P2A6NMY6 339 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 RER1O15258 196 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SYT7O43581 403 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZFPL1O95159 310 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 IL2RAP01589 272 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms