RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PIGAP37287 484 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 DCTP40126 519 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DL3P43628 341 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 XCR1P46094 333 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR3A4PP47883 348 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SULT1A1P50225 295 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SULT1A2P50226 295 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN20P56880 219 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR10A3P58181 314 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 RAB5BP61020 215 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 UBE2MP61081 183 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 STXBP1P61764 594 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 FKBP1BP68106 108 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 IL10RBQ08334 325 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MFGE8Q08431 387 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 UBE2V1Q13404 147 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ITPK1Q13572 414 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CDH18Q13634 790 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CCNIQ14094 377 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 EDDM3AQ14507 147 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DS3Q14952 304 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KIR2DS1Q14954 304 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 RSU1Q15404 277 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GABRA6Q16445 453 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TBC1D28Q2M2D7 210 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 C1orf220Q5T0J3 134 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM78Q5T7P6 136 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 HENMT1Q5T8I9 393 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OTUD1Q5VV17 481 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 AWAT2Q6E213 333 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MFSD12Q6NUT3 480 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 STEAP1BQ6NZ63 245 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 AADACL2Q6P093 401 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF613Q6PF04 617 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF474Q6S9Z5 364 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TMPPEQ6ZT21 453 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MEPCEQ7L2J0 689 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GLT6D1Q7Z4J2 308 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 C6orf120Q7Z4R8 191 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 CHSY1Q86X52 802 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 VRK3Q8IV63 474 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NFAM1Q8NET5 270 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 VN1R2Q8NFZ6 395 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GPR32P1Q8NGA4 272 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR4F6Q8NGB9 312 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR5J2Q8NH18 312 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ACER1Q8TDN7 264 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GPR119Q8TDV5 335 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 EEF1AKMT1Q8WVE0 214 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ASB13Q8WXK3 278 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 DNASE2BQ8WZ79 361 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 OR5P2Q8WZ92 322 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 HIST1H2ACQ93077 130 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TOMM40LQ969M1 308 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MYLPFQ96A32 169 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 IMP4Q96G21 291 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SMARCD1Q96GM5 515 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZBTB45Q96K62 511 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 FCRL1Q96LA6 429 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TSSK2Q96PF2 358 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF347Q96SE7 839 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 APOL4Q9BPW4 351 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 C20orf144Q9BQM9 153 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ABHD14AQ9BUJ0 271 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 FUNDC2Q9BWH2 189 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TM6SF1Q9BZW5 370 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NXF5Q9H1B4 397 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SEMA6AQ9H2E6 1030 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF696Q9H7X3 374 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 PTGES2Q9H7Z7 377 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZDHHC11Q9H8X9 412 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 TBC1D17Q9HA65 648 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 RDH14Q9HBH5 336 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 ZBTB20Q9HC78 741 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SLCO1B3Q9NPD5 702 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 LHX9Q9NQ69 397 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SPHK2Q9NRA0 654 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MRPS18AQ9NVS2 196 aaKnown RBP3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MED29Q9NX70 200 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 C1RLQ9NZP8 487 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MED11Q9P086 117 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 B4GALT7Q9UBV7 327 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 PRODH2Q9UF12 536 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SS18L2Q9UHA2 77 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 STEAP1Q9UHE8 339 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 SNX12Q9UMY4 172 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 KDM5DQ9BY66 1539 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 NOS1P29475 1434 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 MST1RQ04912 1400 aa3.18□□□□□ -1.9
SF3B1-203ENST00000414174 GLYATL1P3A0A0U1RQE8 302 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CENPVL1A0A0U1RR11 272 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CENPVL3A0A0U1RRI6 287 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms