RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CCND2P30279 289 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 OTX1P32242 354 aaPredicted RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 EIF1P41567 113 aaKnown RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GRIA1P42261 906 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 ATP1B3P54709 279 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SLC25A11Q02978 314 aaKnown RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SIGLEC14Q08ET2 396 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 FOXF1Q12946 379 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 ARHGAP19Q14CB8 494 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CHRNA6Q15825 494 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TCEAL5Q5H9L2 206 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 THEM4Q5T1C6 240 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 LIN9Q5TKA1 542 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 Q6ZRN7 208 aaPredicted RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 PEX26Q7Z412 305 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TMEM135Q86UB9 458 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 NKAIN4Q8IVV8 208 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GPR26Q8NDV2 337 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TCEAL3Q969E4 200 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SEH1LQ96EE3 360 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GALNT14Q96FL9 552 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RNF145Q96MT1 663 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SH3GL1Q99961 368 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SPXQ9BT56 116 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CHCHD7Q9BUK0 85 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GCOM2Q9BZD3 368 aaPredicted RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 AZI2Q9H6S1 392 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RETNQ9HD89 108 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 MYOZ1Q9NP98 299 aaPredicted RBP-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RHBDL2Q9NX52 303 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 VANGL2Q9ULK5 521 aa-0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CACNA1SQ13698 1873 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 IGKV2-29A2NJV5 120 aaPredicted RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 GOSR2O14653 212 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 PPP1R2P9O14990 202 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 OR7C2O60412 319 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 ERLIN2O94905 339 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 PAHP00439 452 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 AK1P00568 194 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 IGHG2P01859 326 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 MMP7P09237 267 aaPredicted RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 ATP6V1C1P21283 382 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 CHMLP26374 656 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 VHLP40337 213 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 PPT1P50897 306 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 P2RX1P51575 399 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 UBE2E1P51965 193 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 GPX6P59796 221 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 GMFBP60983 142 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 C2orf54Q08AI8 447 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 TWF1Q12792 350 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 ECH1Q13011 328 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 BIKQ13323 160 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 NCF4Q15080 339 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF77Q15935 545 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 SLC25A35Q3KQZ1 300 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 LDLRAD2Q5SZI1 272 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 TTC23Q5W5X9 447 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 TMPPEQ6ZT21 453 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 EID2Q8N6I1 236 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 NPWQ8N729 165 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 MSANTD4Q8NCY6 345 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF606Q8WXB4 792 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 THRSPQ92748 146 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 GHSRQ92847 366 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 EMG1Q92979 244 aaKnown RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 OTUB2Q96DC9 234 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 C12orf42Q96LP6 360 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 KCNK16Q96T55 309 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 CNN2Q99439 309 aaKnown RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 KCTD14Q9BQ13 255 aaPredicted RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 C1orf50Q9BV19 199 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 VSIRQ9H7M9 311 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 NIPAL2Q9H841 368 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 TMEM9BQ9NQ34 198 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 TAS2R5Q9NYW4 299 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 IL37Q9NZH6 218 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 MTFP1Q9UDX5 166 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 RWDD2AQ9UIY3 292 aa-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 MDC1Q14676 2089 aaKnown RBP-0.03□□□□□ -2.41
RNU2-55P-201ENST00000411146 NAV2Q8IVL1 2488 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 SHANK3Q9BYB0 1731 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 TRPM6Q9BX84 2022 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 NCKAP5O14513 1909 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 LCTP09848 1927 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 TRGV4A0A0C4DH28 118 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 A0A0J9YXV3 536 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 RNF103-CHMP3A0A140T963 221 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 A0A1W2PPV9 198 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 KRT87PA6NCN2 255 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 PLPP1O14494 284 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 ARPC3O15145 178 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 MAPK13O15264 365 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 ZNF208O43345 1280 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 CLIC3O95833 236 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 ANGP03950 147 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 SLC35G6P0C7Q6 338 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 THRAP10827 490 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 NCF1P14598 390 aaPredicted RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms