RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 COG8Q96MW5 612 aa15.33■□□□□ 0.05
PDLIM2-206ENST00000409141 TUBG2Q9NRH3 451 aa15.33■□□□□ 0.05
PDLIM2-206ENST00000409141 C2CD3Q4AC94 2353 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 A0A096LNT2 108 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 PLSCR5A0PG75 271 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 FAM183AA6NL82 134 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 VWC2LB2RUY7 222 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 H3BSA7 217 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 HMGN1P05114 100 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 FCGR1AP12314 374 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 USF1P22415 310 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 RPS27P42677 84 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 NR4A2P43354 598 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 RGS6P49758 472 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 DAPP51397 102 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 CDK5Q00535 292 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 ECH1Q13011 328 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 FAHD1Q6P587 224 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 HIPK1Q86Z02 1210 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 OR6K6Q8NGW6 343 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 LRTOMTQ8WZ04 291 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 MED20Q9H944 212 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 WDR76Q9H967 626 aa15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 PAPOLBQ9NRJ5 636 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-206ENST00000409141 G3V2T6 193 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 ZNF23P17027 643 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 PAICSP22234 425 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 MAGEB1P43366 347 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 ZNF81P51508 661 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 BLVRAP53004 296 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 RIPPLY3P57055 190 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 CCL8P80075 99 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 GGTLC2Q14390 218 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 RSPO1Q2MKA7 263 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 PCGF3Q3KNV8 242 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 GTF3AQ92664 365 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 RDH5Q92781 318 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 PTP4A1Q93096 173 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 CMBLQ96DG6 245 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 MAP6Q96JE9 813 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 ATF6BQ99941 703 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 HCAR1Q9BXC0 346 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 TEX12Q9BXU0 123 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 POFUT1Q9H488 388 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 COMMD3-BMI1R4GMX3 469 aa15.32■□□□□ 0.04
PDLIM2-206ENST00000409141 NIPBLQ6KC79 2804 aaeCLIP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 PRR23D1E9PI22 279 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 F5H5K5 113 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 J3QW42 95 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 ZNF593O00488 134 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 TIMM8AO60220 97 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 SPARCP09486 303 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 PRR23D2P0DMB1 279 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 COL8A2P25067 703 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 GIFP27352 417 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 ENTPD1P49961 510 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 MMP15P51511 669 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 CRISP1P54107 249 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 PSG7Q13046 419 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 TSTQ16762 297 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 TMEM255AQ5JRV8 349 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 TMEM236Q5W0B7 351 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 ZDHHC13Q8IUH4 622 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 OR5L1Q8NGL2 311 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 APOBEC3DQ96AK3 386 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 PLEKHA8Q96JA3 519 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 BPESC1Q9GZL8 116 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 OR51V1Q9H2C8 321 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 CYSLTR2Q9NS75 346 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 DECR2Q9NUI1 292 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 NKIRAS2Q9NYR9 191 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 HIVEP2P31629 2446 aa15.31■□□□□ 0.04
PDLIM2-206ENST00000409141 NF1P21359 2839 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 SURF4O15260 269 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 TPD52L2O43399 206 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 SPRY3O43610 288 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 NCR1O76036 304 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 LIPAP38571 399 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 KRTAP1-1Q07627 177 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 TMEM249Q2WGJ8 235 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 LINC01590Q5TEZ4 76 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 PLBD1Q6P4A8 553 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 DCXRQ7Z4W1 244 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 HAVCR1Q96D42 359 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 SEMA6AQ9H2E6 1030 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 SLC25A19Q9HC21 320 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 PNRC2Q9NPJ4 139 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 KRT84Q9NSB2 600 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 CR1P17927 2039 aa15.3■□□□□ 0.04
PDLIM2-206ENST00000409141 ABCA1O95477 2261 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 NSD1Q96L73 2696 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 GLCEO94923 617 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 ACSM4P0C7M7 580 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 GSTT1P30711 240 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 TPTEP56180 551 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 ACTR3P61158 418 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 KRTAP27-1Q3LI81 207 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 TEX30Q5JUR7 227 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 CPOQ8IVL8 374 aa15.29■□□□□ 0.04
PDLIM2-206ENST00000409141 PARP8Q8N3A8 854 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms