RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 BCHEP06276 602 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 NR2F1P10589 423 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 HOXB9P17482 250 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 RFX2P48378 723 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 POLR2JP52435 117 aaKnown RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 ECH1Q13011 328 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 EXOSC2Q13868 293 aaKnown RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 SPANXN2Q5MJ10 180 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 TMEM236Q5W0B7 351 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 ABLIM2Q6H8Q1 611 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 ZNF836Q6ZNA1 936 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 TMPRSS11FQ6ZWK6 438 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 GRINAQ7Z429 371 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 FUNDC1Q8IVP5 155 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 MSRB3Q8IXL7 192 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 CIARTQ8N365 385 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 SLC38A5Q8WUX1 472 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 NEUROG1Q92886 237 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 MAL2Q969L2 176 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 PERPQ96FX8 193 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 CCL19Q99731 98 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 RNF121Q9H920 327 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 TPT1P8Q9HAU6 139 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 EXOSC3Q9NQT5 275 aaKnown RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 SMPD3Q9NY59 655 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 ZIM2Q9NZV7 527 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 TBC1D24Q9ULP9 559 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 LYVE1Q9Y5Y7 322 aa8.52□□□□□ -1.05
NIF3L1-202ENST00000409020 DSPPQ9NZW4 1301 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 M0QZK8 103 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 AIPO00170 330 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 FRS3O43559 492 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 SMPD2O60906 423 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 LALBAP00709 142 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TFPIP10646 304 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 NR2C1P13056 603 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 ARSBP15848 533 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 RAB3BP20337 219 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 CRHBPP24387 322 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 GIFP27352 417 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TACR3P29371 465 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 APOBEC1P41238 236 aaKnown RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 OR3A2P47893 321 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 IDH3AP50213 366 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 NUDT6P53370 316 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 GP2P55259 537 aaKnown RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 FOXG1P55316 489 aaPredicted RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 PSME3P61289 254 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 NKX6-1P78426 367 aaPredicted RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 HOXC5Q00444 222 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 MS4A2Q01362 244 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 KLF10Q13118 480 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 CEACAM7Q14002 265 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 Q5PR19 223 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 SFRP5Q5T4F7 317 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 AVPI1Q5T686 147 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 RASSF6Q6ZTQ3 369 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 Q71RC1 249 aaPredicted RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 SPAG16Q8N0X2 631 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 MIER2Q8N344 545 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 ARRDC1Q8N5I2 433 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 MOSPD2Q8NHP6 518 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 CYGBQ8WWM9 190 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 IGFBPL1Q8WX77 278 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 GATAD2BQ8WXI9 593 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TMEM234Q8WY98 164 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TMEM19Q96HH6 336 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 ZNF385AQ96PM9 386 aaKnown RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TMEM204Q9BSN7 226 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TEX12Q9BXU0 123 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 MTHFD2LQ9H903 347 aaPredicted RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 BEX4Q9NWD9 120 aaPredicted RBP8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 SLC25A37Q9NYZ2 338 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 GPR160Q9UJ42 338 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 GPR52Q9Y2T5 361 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 PCDHB14Q9Y5E9 798 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 USF3Q68DE3 2245 aa8.51□□□□□ -1.05
NIF3L1-202ENST00000409020 TMED7-TICAM2A0A0A6YYA0 188 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 CDHR4A6H8M9 788 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 LDLRAD4O15165 306 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 CHP2O43745 196 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 GADD45GO95257 159 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 OR8G3PP0DMU2 310 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 FOLR2P14207 255 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 PPP3CBP16298 524 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 IL7RP16871 459 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 IGHV1-2P23083 117 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 ACAA2P42765 397 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 RAB5BP61020 215 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 NHLH2Q02577 135 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 MVKQ03426 396 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 GUCA2BQ16661 112 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 BEX5Q5H9J7 111 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 PAGE3Q5JUK9 113 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 C17orf107Q6ZR85 190 aa8.5□□□□□ -1.05
NIF3L1-202ENST00000409020 DCXRQ7Z4W1 244 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms