RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 BMI1P35226 326 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RFC3P40938 356 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 BCAP31P51572 246 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RAB11AP62491 216 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 SLAQ13239 276 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 DGCR6Q14129 220 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RAB11BQ15907 218 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 TMEM205Q6UW68 189 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 Q6ZR03 302 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 LINC01551Q86U37 167 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RIMKLAQ8IXN7 391 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 FAM71AQ8IYT1 594 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 METTL13Q8N6R0 699 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 SNX31Q8N9S9 440 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR10G4Q8NGN3 311 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR5W2Q8NH69 310 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 TMEM230Q96A57 120 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 TM4SF18Q96CE8 201 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 CYYR1Q96J86 154 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR2A5Q96R48 311 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 FOXC2Q99958 501 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RHOXF2Q9BQY4 288 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 SIKE1Q9BRV8 207 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZYG11BQ9C0D3 744 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 STMN4Q9H169 189 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR2AG1Q9H205 316 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 VCXQ9H320 206 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 PIGUQ9H490 435 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 RGCCQ9H4X1 137 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 XKR8Q9H6D3 395 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 TDRD3Q9H7E2 651 aaKnown RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 MRPS30Q9NP92 439 aaKnown RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 ISYNA1Q9NPH2 558 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 TRMT112Q9UI30 125 aaKnown RBP2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 PSG11Q9UQ72 335 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 KCNE3Q9Y6H6 103 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 COMMD3-BMI1R4GMX3 469 aa2.43□□□□□ -2.02
HMGB1P17-201ENST00000403495 MROH7-TTC4A0A0A0MT08 1334 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 MROH7Q68CQ1 1323 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 KIF27Q86VH2 1401 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 LRP4O75096 1905 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNFX1Q9P2E3 1918 aaKnown RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 KCNE1BA0A087WTH5 132 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 A0A1W2PP18 115 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 M0QX08 132 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PLPP1O14494 284 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 TRDMT1O14717 391 aaKnown RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 NEMFO60524 1076 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 SPAG7O75391 227 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 FOXH1O75593 365 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CSTAP01040 98 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 HLA-HP01893 362 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 HBE1P02100 147 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 HLA-DPB1P04440 258 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CD3GP09693 182 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CT45A6P0DMU7 189 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CT45A5P0DMU8 189 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CT45A7P0DMV0 189 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PGAM1P18669 254 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CPN2P22792 545 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 LONP1P36776 959 aaKnown RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CDKN2DP55273 166 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 DAOAP59103 153 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PPP1CBP62140 327 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 SEMG2Q02383 582 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CDH17Q12864 832 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 STK11Q15831 433 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 FBXO48Q5FWF7 155 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CT45A1Q5HYN5 189 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 TPTE2P1Q5T6R2 138 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PRMT9Q6P2P2 845 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 SPESP1Q6UW49 350 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 VTCN1Q7Z7D3 282 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNF547Q8IVP9 402 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PGAM4Q8N0Y7 254 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 JAGN1Q8N5M9 183 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 NPWQ8N729 165 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 CT45A3Q8NHU0 189 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 APH1AQ96BI3 265 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 PDXPQ96GD0 296 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNF681Q96N22 645 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 SLC17A9Q9BYT1 436 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 SAV1Q9H4B6 383 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 LZTFL1Q9NQ48 299 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 STK38LQ9Y2H1 464 aa2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 TSSC4Q9Y5U2 329 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 TET2Q6N021 2002 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P17-201ENST00000403495 LINC00854A0A1B0GVQ3 168 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNF701M0R085 212 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 NME4O00746 187 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZBTB5O15062 677 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 CHMP2AO43633 222 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 NMT2O60551 498 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 RP2O75695 350 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 MBP02144 154 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 CRYGCP07315 174 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms