RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 HSPB6O14558 160 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 PLPP2O43688 288 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 ANXA7P20073 488 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 TUBG1P23258 451 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 SSX1Q16384 188 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 OTPQ5XKR4 325 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 PAQR8Q8TEZ7 354 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 DERL3Q96Q80 235 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 EXOSC3Q9NQT5 275 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 EXOGQ9Y2C4 368 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 CCDC187A0A096LP49 1063 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 CDC42EP2O14613 210 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 FFAR1O14842 300 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 RPP30P78346 268 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC51BQ86UW2 128 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 ANKRD9Q96BM1 317 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 TAAR9Q96RI9 348 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 EDEM2Q9BV94 578 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 CYSLTR2Q9NS75 346 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 LUZP4Q9P127 313 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 KIF25Q9UIL4 384 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
PCDHGA11-201ENST00000398587 TNFSF15O95150 251 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 CLDN15P56746 228 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 TSC22D1Q15714 1073 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 IAH1Q2TAA2 248 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC25A35Q3KQZ1 300 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 WNT11O96014 354 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 RAB5BP61020 215 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 EBPQ15125 230 aaKnown RBP12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 SMIM4Q8WVI0 70 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 C11orf40Q8WZ69 217 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 KIR2DS1A0A191URI9 304 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 SULT1C2O00338 296 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 KIR2DS4P43632 304 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 PSG6Q00889 435 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 MYBPHQ13203 477 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 KIR2DS1Q14954 304 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 ORAI1Q96D31 301 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 NMNAT2Q9BZQ4 307 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 HRASLSQ9HDD0 168 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 GNG12Q9UBI6 72 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 MTCH2Q9Y6C9 303 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 A0A1W2PS29 197 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 CYR61O00622 381 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 SLC17A2O00624 439 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 FBXO24O75426 580 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 GIPP09681 153 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 RFX2P48378 723 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 MRPL41Q8IXM3 137 aaKnown RBP12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 BHLHE23Q8NDY6 225 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 SPACA5Q96QH8 159 aa12.84□□□□□ -0.35
PCDHGA11-201ENST00000398587 PLXNA1Q9UIW2 1896 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 MT-CO2P00403 227 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 CLDN20P56880 219 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 OGFOD3Q6PK18 319 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 FAM109AQ8N4B1 249 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 NOXO1Q8NFA2 376 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR4D11Q8NGI4 311 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR2V1Q8NHB1 315 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 KIRREL1Q96J84 757 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 WDFY2Q96P53 400 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 SPTA1P02549 2419 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 SIX6O95475 246 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 EMP3P54852 163 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 PPIAP62937 165 aaKnown RBP12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 FXNQ16595 210 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 PLXDC2Q6UX71 529 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 DDOQ99489 341 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 SMLR1H3BR10 107 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 MSTNO14793 375 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 XRCC2O43543 280 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 ARR3P36575 388 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 LGI3Q8N145 548 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR10G3Q8NGC4 313 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 POFUT1Q9H488 388 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 UCK1Q9HA47 277 aa12.83□□□□□ -0.36
PCDHGA11-201ENST00000398587 POM121CA8CG34 1229 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms