RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SYT4Q9H2B2 425 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 PPP1R14DQ9NXH3 145 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 PPP4R1LQ9P1A2 415 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 VCANP13611 3396 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 CELA2BP08218 269 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 SFTA3P0C7M3 94 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 CCKBRP32239 447 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 KIR3DL2P43630 455 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 NAAAQ02083 359 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 DMWDQ09019 674 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 RAB30Q15771 203 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 METTL27Q8N6F8 245 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF524Q96C55 264 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 KLHDC3Q9BQ90 382 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 RHOFQ9HBH0 211 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 MMP25Q9NPA2 562 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 KCNG2Q9UJ96 466 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 FAM96BQ9Y3D0 163 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 TMEM212A6NML5 194 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 TERTO14746 1132 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 PRSS3P35030 304 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ATP1B3P54709 279 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 C2orf76Q3KRA6 126 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 WDR38Q5JTN6 314 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 WBP2NLQ6ICG8 309 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 DRAM2Q6UX65 266 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ATG4DQ86TL0 474 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 BAP18Q8IXM2 172 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 KTI12Q96EK9 354 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 LAT2Q9GZY6 243 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 OR10A5Q9H207 317 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 CHRDQ9H2X0 955 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ASH2LQ9UBL3 628 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ARID1BQ8NFD5 2236 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 APBB3O95704 486 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ALOX5APP20292 161 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ITGA3P26006 1051 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 CD34P28906 385 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 AVPR2P30518 371 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 CAV2P51636 162 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 EGR4Q05215 589 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 AIMP2Q13155 320 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 SSX2Q16385 188 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 MST1LQ2TV78 715 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 POMZP3Q6PJE2 187 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC35D2Q76EJ3 337 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 AVL9Q8NBF6 648 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 PLPP7Q8NBV4 271 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 OR10R2Q8NGX6 335 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 RELTQ969Z4 430 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 PPP1R14AQ96A00 147 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 FAM3DQ96BQ1 224 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 ATG5Q9H1Y0 275 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 PCDHGA1Q9Y5H4 931 aa14.36□□□□□ -0.11
CHMP1A-201ENST00000397901 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 GUSBP08236 651 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 HPGDP15428 266 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 GPR3P46089 330 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 SPCS3P61009 180 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RAB11BQ15907 218 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 ARHGAP40Q5TG30 622 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 STEAP1BQ6NZ63 245 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 OR10H5Q8NGA6 315 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RNASE11Q8TAA1 199 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC37A2Q8TED4 501 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RAB3CQ96E17 227 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 C4orf45Q96LM5 186 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 TMEM68Q96MH6 324 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 INTS14Q96SY0 518 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 TUBA4BQ9H853 241 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 PRTFDC1Q9NRG1 225 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC22A13Q9Y226 551 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF432O94892 652 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 HLA-DQA2P01906 255 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RNH1P13489 461 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 RBP2P50120 134 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 MED25Q71SY5 747 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 OOSP2Q86WS3 158 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 ARRDC1Q8N5I2 433 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 NUDCD2Q8WVJ2 157 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 MCHR2Q969V1 340 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 SEC22AQ96IW7 307 aa14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC25A21Q9BQT8 299 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-201ENST00000397901 COL4A2P08572 1712 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 M0QYG6 137 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 CDC40O60508 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 ASAH2BP0C7U1 165 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 FAM157CP0CG43 387 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 PNMTP11086 282 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 RAB5AP20339 215 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 GLP1RP43220 463 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 PRKXP51817 358 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 HGFACQ04756 655 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms