RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TAS2R31P59538 309 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 RPUSD3Q6P087 351 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 P4HTMQ9NXG6 502 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 VSTM5A8MXK1 200 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 GNB5O14775 395 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 PLA2G10O15496 165 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SCAF4O95104 1147 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SP9P0CG40 484 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 AHCYP23526 432 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 DTYMKP23919 212 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ARHGDIBP52566 201 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 HOXC5Q00444 222 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SRSF4Q08170 494 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM42Q69YG0 159 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 FAM199XQ6PEV8 388 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NAXDQ8IW45 347 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 LAX1Q8IWV1 398 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ZDHHC22Q8N966 263 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 OR1J4Q8NGS1 313 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 MR1Q95460 341 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SPSB4Q96A44 273 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 DKK4Q9UBT3 224 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 IKZF2Q9UKS7 526 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 DHDHQ9UQ10 334 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NOTCH2Q04721 2471 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 OR6C6A6NF89 314 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 STK17BO94768 372 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MT-CO3P00414 261 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 JMJD7P0C870 316 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 PMPCAQ10713 525 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 PERM1Q5SV97 790 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ISLR2Q6UXK2 745 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TRMT61AQ96FX7 289 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 CLCC1Q96S66 551 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 THAP7Q9BT49 309 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 EDEM2Q9BV94 578 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 NELFAQ9H3P2 528 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MCTS1Q9ULC4 181 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 POLR1DQ9Y2S0 133 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 PLGP00747 810 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ACVR1BP36896 505 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 GFRA1P56159 465 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 SHEQ5VZ18 495 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 FAM180BQ6P0A1 224 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM65Q6PI78 240 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MEIOBQ8N635 442 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 SSC4DQ8WTU2 575 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 SNAPC3Q92966 411 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ABHD14BQ96IU4 210 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 NEDD4LQ96PU5 975 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 HCAR1Q9BXC0 346 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MRPL22Q9NWU5 206 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF221Q9UK13 617 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 COL27A1Q8IZC6 1860 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 UBE2QL1A1L167 161 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 HRKO00198 91 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 KRT33AO76009 404 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 UMODP07911 640 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 IGFBP1P08833 259 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 PTGDSP41222 190 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LSM11P83369 360 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 DHODHQ02127 395 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 CSTF1Q05048 431 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 RAB11BQ15907 218 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM31Q5JXX7 168 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 SLC22A16Q86VW1 577 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF761Q86XN6 746 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 WDSUB1Q8N9V3 476 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ASB5Q8WWX0 329 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ULBP3Q9BZM4 244 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ING4Q9UNL4 249 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 J3QLW9 94 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 OR2A4O95047 310 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF19P17023 458 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 FUT4P22083 530 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 BDKRB2P30411 391 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LSM3P62310 102 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LIN54Q6MZP7 749 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LINC00596Q86U02 117 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 OR6N2Q8NGY6 317 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 OR2A7Q96R45 310 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MED9Q9NWA0 146 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 PTRH2Q9Y3E5 179 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM269A0A1B0GVZ9 245 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 CYTIPO60759 359 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 GNALP38405 381 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 EIF5AP63241 154 aaKnown RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 GABREP78334 506 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LANCL3Q6ZV70 420 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 LRRC17Q8N6Y2 441 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 OR2V1Q8NHB1 315 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 AKAP1Q92667 903 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ELOVL3Q9HB03 270 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 FAM212BQ9NTI7 297 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM74BQ9NUR3 256 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TBC1D24Q9ULP9 559 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 MS4A18H0YCH9 400 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 EDNRAP25101 427 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 TPTEP56180 551 aa5.22□□□□□ -1.57
PTPRD-206ENST00000397617 ADAM8P78325 824 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms