RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RPS19P39019 145 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CD97P48960 835 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LPAL2Q16609 132 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TP53I3Q53FA7 332 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CD200R1LQ6Q8B3 271 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF813Q6ZN06 617 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SFTPA1Q8IWL2 248 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLAMF6Q96DU3 332 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RRNAD1Q96FB5 475 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NUDT16L1Q9BRJ7 211 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NPIPA5A0A0B4J1W7 369 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 A0A0G2JMP0 313 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 A0A0U1RQV5 110 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MEIOCA2RUB1 952 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DCDC2BA2VCK2 349 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SNRPGP15A8MWD9 76 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NPIPA7E9PJI5 369 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CTDSP2O14595 271 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RP2O75695 350 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NPIPA8P0DM63 369 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 AMY2BP19961 511 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PCMT1P22061 227 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DNASE1P24855 282 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 UQCRC1P31930 480 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ETV5P41161 510 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RGS19P49795 217 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ETV1P50549 477 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GP2P55259 537 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PCK2Q16822 640 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CCDC190Q86UF4 302 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR4M2Q8NGB6 313 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR2T35Q8NGX2 323 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF721Q8TF20 911 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NRSN2Q9GZP1 204 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LANCL2Q9NS86 450 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FKBP14Q9NWM8 211 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC23A1Q9UHI7 598 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 AK6Q9Y3D8 172 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TRAV18A0A075B6X5 111 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LOC102723996A0A087X1L8 192 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EEF1E1O43324 174 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MAS1P04201 325 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ISG15P05161 165 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF750Q32MQ0 723 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SCGB2B2Q4G0G5 96 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF511Q8NB15 262 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SYNPRQ8TBG9 265 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EDARADDQ8WWZ3 215 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 UBE2FQ969M7 185 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TXNDC15Q96J42 360 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TSSK2Q96PF2 358 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF700Q9H0M5 742 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 METTL8Q9H825 291 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 POU2F3Q9UKI9 436 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 HSPB11Q9Y547 144 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CACNG2Q9Y698 323 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ACANP16112 2415 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 QDPRP09417 244 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 APEX1P27695 318 aaKnown RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 RAD52P43351 418 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 FAM27BQ5VT28 67 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 FAM185AQ8N0U4 392 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 RNF133Q8WVZ7 376 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 YIPF6Q96EC8 236 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PDCD1LG2Q9BQ51 273 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 ABHD6Q9BV23 337 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 EGLN1Q9GZT9 426 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 OR10A4Q9H209 315 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PRMT8Q9NR22 394 aaPredicted RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 NLKQ9UBE8 527 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 TEX13DA0A0J9YY54 714 aaPredicted RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 TRAPPC2LH3BP13 241 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 DVL2O14641 736 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 CTDSPLO15194 276 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 ONECUT2O95948 504 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PGAM2P15259 253 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 ABOP16442 354 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 RAB6AP20340 208 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PCGF3Q3KNV8 242 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PRAMEF17Q5VTA0 474 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 IGFN1Q86VF2 1251 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 SEMA6DQ8NFY4 1073 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 NUDT9Q9BW91 350 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 CYB5R1Q9UHQ9 305 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF346Q9UL40 294 aaKnown RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PPH5 198 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PQ09 198 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 LNP1A1A4G5 178 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 SCGB2A1O75556 95 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 EPPINO95925 133 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 CRHP06850 196 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 RRAS2P62070 204 aaPredicted RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 SULF2Q8IWU5 870 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 LAX1Q8IWV1 398 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 C1orf87Q8N0U7 546 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 SMAP2Q8WU79 429 aaPredicted RBP3.04□□□□□ -1.92
VPS13C-203ENST00000395896 PSMF1Q92530 271 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF442Q9H7R0 627 aa3.04□□□□□ -1.92
VPS13C-203ENST00000395896 FBXL4Q9UKA2 621 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms