RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 MMP16P51512 607 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 NR0B2Q15466 257 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 PLEKHN1Q494U1 663 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 C3orf33Q6P1S2 294 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 LSRQ86X29 649 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 CARFQ8N187 725 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 GTPBP8Q8N3Z3 284 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 OR4K17Q8NGC6 315 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 OR5D14Q8NGL3 314 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ATOH1Q92858 354 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 NPAS1Q99742 590 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 PTDSS2Q9BVG9 487 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 TCEAL2Q9H3H9 227 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 GPR27Q9NS67 375 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 LANCL2Q9NS86 450 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 HPF1Q9NWY4 346 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CGGBP1Q9UFW8 167 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 PISDQ9UG56 409 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 NPIPA1Q9UND3 350 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC5A6Q9Y289 635 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 MPDZO75970 2070 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ATG2AQ2TAZ0 1938 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 TMEM235A6NFC5 223 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CCDC85CA6NKD9 419 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 H3BSH0 61 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF208O43345 1280 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ALOX12BO75342 701 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 PLGP00747 810 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 IGLV3-19P01714 112 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF28P17035 718 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 PSMB6P28072 239 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CBX5P45973 191 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 GABRA4P48169 554 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 SUMO3P55854 103 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 SPOCK1Q08629 439 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ASPHD2Q6ICH7 369 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 POMZP3Q6PJE2 187 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 IL34Q6ZMJ4 242 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ARRDC1Q8N5I2 433 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CHST4Q8NCG5 386 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 SLC26A10Q8NG04 563 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF721Q8TF20 911 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ST8SIA1Q92185 356 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 G6PC2Q9NQR9 355 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 CUTCQ9NTM9 273 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 MMP17Q9ULZ9 603 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 VSIG4Q9Y279 399 aa9□□□□□ -0.97
UBE2D3-208ENST00000394803 COA3Q9Y2R0 106 aaPredicted RBP9□□□□□ -0.97
UBE2D3-208ENST00000394803 IGKV3D-11A0A0A0MRZ8 115 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 TEX13DA0A0J9YY54 714 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 FAM25EA8MYX2 175 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 C10orf142B7Z368 130 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 F8VVB4 439 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 F8VWA3 439 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 SULT2B1O00204 365 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 FGF16O43320 207 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 MTRF1O75570 445 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 SNAPINO95295 136 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 GPANK1O95872 356 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 IGHV4-34P06331 123 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 CTSBP07858 339 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 GABRG2P18507 467 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 AIMP2Q13155 320 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 KCNAB1Q14722 419 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 EBPQ15125 230 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 ZNF813Q6ZN06 617 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 C17orf107Q6ZR85 190 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 ACBD4Q8NC06 268 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 OR1M1Q8NGA1 313 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 RPP25Q9BUL9 199 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 RAB33BQ9H082 229 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 KCNK15Q9H427 330 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 TRBV6-7A0A0A0MS04 114 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 TMEM218A2RU14 115 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 C5orf51A6NDU8 294 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 RAB27BO00194 218 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 DDAH2O95865 285 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 PLATP00750 562 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 CRHP06850 196 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 PRKACAP17612 351 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 VAMP1P23763 118 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 GNALP38405 381 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 NR0B1P51843 470 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 ATP1B3P54709 279 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 EIF3IQ13347 325 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 NKPD1Q17RQ9 610 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 LRRC37A5PQ49AS3 106 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 TMEM128Q5BJH2 165 aa8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 HAGHLQ6PII5 290 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-208ENST00000394803 DRAM2Q6UX65 266 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms