RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ZNF671Q8TAW3 534 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 SLC7A6Q92536 515 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 INTS12Q96CB8 462 aaKnown RBP16.78■□□□□ 0.28
CLDND1-203ENST00000394181 SOX7Q9BT81 388 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 SPRR3Q9UBC9 169 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 KLK13Q9UKR3 277 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 RCE1Q9Y256 329 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 SLC5A6Q9Y289 635 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 E9PLN8 166 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 ISG15P05161 165 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 NR2C1P13056 603 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 TAF13Q15543 124 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 RSPO4Q2I0M5 234 aaPredicted RBP16.78■□□□□ 0.28
CLDND1-203ENST00000394181 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 Q8N402 240 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 FAM109AQ8N4B1 249 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 OR13C3Q8NGS6 347 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 PNPLA2Q96AD5 504 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 SLITRK2Q9H156 845 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 LIN7BQ9HAP6 207 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 ACKR4Q9NPB9 350 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 TAS2R4Q9NYW5 299 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 ABRACLQ9P1F3 81 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 ADAM30Q9UKF2 790 aa16.78■□□□□ 0.28
CLDND1-203ENST00000394181 HSD11B1P28845 292 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 ZNF121P58317 390 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-203ENST00000394181 PLA2G7Q13093 441 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 RSPO1Q2MKA7 263 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-203ENST00000394181 METAP1DQ6UB28 335 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-203ENST00000394181 TUSC5Q8IXB3 177 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 ELMOD2Q8IZ81 293 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 MEIOBQ8N635 442 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 TMEM178AQ8NBL3 297 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 ABHD1Q96SE0 405 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 LDAHQ9H6V9 325 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 HHLA2Q9UM44 414 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 PCDHGA9Q9Y5G4 932 aaKnown RBP16.77■□□□□ 0.28
CLDND1-203ENST00000394181 KCNMB2Q9Y691 235 aa16.77■□□□□ 0.28
CLDND1-203ENST00000394181 RTTNQ86VV8 2226 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 PATE4P0C8F1 98 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 IGFL2Q6UWQ7 119 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 IZUMO1Q8IYV9 350 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 OR51A2Q8NGJ7 313 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 OR5V1Q9UGF6 321 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 SPATA2Q9UM82 520 aa16.77■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-203ENST00000394181 DCTDP32321 178 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF84P51523 738 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 CCDC92Q53HC0 331 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF704Q6ZNC4 412 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-203ENST00000394181 UBE2J2Q8N2K1 259 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 GPR137CQ8N3F9 429 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 OR51E1Q8TCB6 317 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 EXO5Q9H790 373 aa16.76■□□□□ 0.27
CLDND1-203ENST00000394181 ANXA2P2A6NMY6 339 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 LANCL1O43813 399 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 PFDN1O60925 122 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 ANXA2P07355 339 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 B4GALT1P15291 398 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 ACHEP22303 614 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 RFX2P48378 723 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CX3CR1P49238 355 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 PSMA6P60900 246 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 MRPS34P82930 218 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CEACAM16Q2WEN9 425 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 TSPO2Q5TGU0 170 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 FAM27BQ5VT28 67 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 SERPINA12Q8IW75 414 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CMTM4Q8IZR5 234 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 PLPP7Q8NBV4 271 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 OR8B12Q8NGG6 310 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 SNRNP27Q8WVK2 155 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 SLC25A38Q96DW6 304 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 NEDD4LQ96PU5 975 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 ZDHHC11Q9H8X9 412 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CALHM2Q9HA72 323 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CDV3Q9UKY7 258 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 NOSIPQ9Y314 301 aaKnown RBP16.75■□□□□ 0.27
CLDND1-203ENST00000394181 IGKV3D-15A0A087WSY6 115 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 A0A1B0GTI1 187 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 FUOMA2VDF0 154 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 CDK2AP1O14519 115 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 PLA2G10O15496 165 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 DBHP09172 617 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 HIST1H3AP68431 136 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 HIST2H3PS2Q5TEC6 136 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 HIST2H3AQ71DI3 136 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 NRARPQ7Z6K4 114 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 FGFBP3Q8TAT2 258 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 FGGYQ96C11 551 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 KCNK15Q9H427 330 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 GPR35Q9HC97 309 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 TMEM38BQ9NVV0 291 aa16.75■□□□□ 0.27
CLDND1-203ENST00000394181 TRGV5A0A0B4J1U4 118 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 F5H5K5 113 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 KLK10O43240 276 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 SYNGR4O95473 234 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 APOA1P02647 267 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 ITGA5P08648 1049 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 UBCP0CG48 685 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms