RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 SETD1AO15047 1707 aaKnown RBP-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 COL24A1Q17RW2 1714 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 SIGLEC1Q9BZZ2 1709 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 FMN2Q9NZ56 1722 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ABCC4O15439 1325 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 SPAG9O60271 1321 aaKnown RBP-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP8B3O60423 1300 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ELP1O95163 1332 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ABCB11O95342 1321 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ARID4BQ4LE39 1312 aaPredicted RBP-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP3K19Q56UN5 1328 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF123Q5XPI4 1314 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ITIH6Q6UXX5 1313 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 MROH5Q6ZUA9 1318 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 WDR19Q8NEZ3 1342 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 SH3TC1Q8TE82 1336 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 KIF16BQ96L93 1317 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 CLSPNQ9HAW4 1339 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 PIEZO2Q9H5I5 2752 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 NBASA2RRP1 2371 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 F8P00451 2351 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 ZFC3H1O60293 1989 aaKnown RBP-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 PLXNC1O60486 1568 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 PCF11O94913 1555 aaKnown RBP-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 MAST1Q9Y2H9 1570 aa-0.1□□□□□ -2.42
TRAJ54-201ENST00000390484 SDK1Q7Z5N4 2213 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 USP34Q70CQ2 3546 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 REV3LO60673 3130 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HTTP42858 3142 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC144AA2RUR9 1427 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DISP2A7MBM2 1401 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NPHP4O75161 1426 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZFYVE9O95405 1425 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DCCP43146 1447 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 WRNQ14191 1432 aaPredicted RBP eCLIP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NPATQ14207 1427 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NCOA1Q15788 1441 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ARHGAP31Q2M1Z3 1444 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM135BQ49AJ0 1406 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RIC1Q4ADV7 1423 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CD109Q6YHK3 1445 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FGD6Q6ZV73 1430 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF27Q86VH2 1401 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CASKIN1Q8WXD9 1431 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRG4Q92954 1404 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 YTHDC2Q9H6S0 1430 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ASH1LQ9NR48 2969 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AKAP6Q13023 2319 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PTPRQQ9UMZ3 2332 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF142P52746 1687 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PBRM1Q86U86 1689 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 THSD7AQ9UPZ6 1657 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NF1P21359 2839 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LRP4O75096 1905 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATMQ13315 3056 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ADGRG4Q8IZF6 3080 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TECTAO75443 2155 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MUC4Q99102 2169 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SPTA1P02549 2419 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV20OR9-2A0A075B6H5 130 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGLV4-60A0A075B6I1 120 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGLV3-16A0A075B6K0 115 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV24-1A0A075B6N3 115 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV3-64A0A075B6Q5 118 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRGV2A0A075B6R0 118 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV7A0A075B6U4 112 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LOC100509620A0A075B734 347 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV3OR15-7A0A075B7D8 119 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV26-1A0A087WT03 109 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KCNE1BA0A087WTH5 132 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A087WUU8 490 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A087WVE0 104 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A087WX48 190 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGKV2D-26A0A0A0MRZ7 120 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV6-7A0A0A0MS04 114 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TMED7-TICAM2A0A0A6YYA0 188 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV19A0A0A6YYK7 116 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRGV5A0A0B4J1U4 118 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV9A0A0B4J1U6 114 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV2-26A0A0B4J1V2 119 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV7-81A0A0B4J1V7 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV3A0A0B4J244 114 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV12-1A0A0B4J245 112 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV1-1A0A0B4J248 108 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV41A0A0B4J266 112 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV25A0A0B4J276 109 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV3OR16-9A0A0B4J2B5 98 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV2OR16-5A0A0B4J2B6 119 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0B4J2C4 111 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV1-69DA0A0B4J2H0 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV1-3A0A0C4DH29 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV1-18A0A0C4DH31 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGKV2-24A0A0C4DH68 120 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0D9SEW6 157 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LOC107984156A0A0G2JMH3 177 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0G2JMM0 328 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0G2JMP0 313 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRBV7-9A0A0J9YWB2 115 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms